RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
KDM3B-206ENST00000509468 INTS13Q9NVM9 706 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 FAM186AA6NE01 2351 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 RIF1Q5UIP0 2472 aaKnown RBP13.57□□□□□ -0.24
KDM3B-206ENST00000509468 COL4A2P08572 1712 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 MYBPHLA2RUH7 354 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 EIF3DO15371 548 aaKnown RBP eCLIP13.57□□□□□ -0.24
KDM3B-206ENST00000509468 F11P03951 625 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 PCSK1P29120 753 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 AVPR1AP37288 418 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 CXCL12P48061 93 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 WNT7BP56706 349 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 NLRP12P59046 1061 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 E2F4Q16254 413 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 ATL3Q6DD88 541 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 ERMP1Q7Z2K6 904 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 CMTM8Q8IZV2 173 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 CXorf38Q8TB03 319 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 DHX58Q96C10 678 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 LRRC3BQ96PB8 259 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 C7orf25Q9BPX7 421 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 PI4K2AQ9BTU6 479 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 TRIM9Q9C026 710 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 MAGEF1Q9HAY2 307 aa13.57□□□□□ -0.24
KDM3B-206ENST00000509468 UXTQ9UBK9 157 aaPredicted RBP13.57□□□□□ -0.24
KDM3B-206ENST00000509468 SPECC1L-ADORA2AF8WAN1 911 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 LILRB5O75023 590 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 HMGA1P17096 107 aaKnown RBP13.56□□□□□ -0.24
KDM3B-206ENST00000509468 CDR1P51861 262 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 ASIC1P78348 528 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 CYP4F8P98187 520 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 AMPD2Q01433 879 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 INTS6LQ5JSJ4 861 aaKnown RBP13.56□□□□□ -0.24
KDM3B-206ENST00000509468 TSSK4Q6SA08 328 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 SPATA2LQ8IUW3 424 aaPredicted RBP13.56□□□□□ -0.24
KDM3B-206ENST00000509468 KIAA2013Q8IYS2 634 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 SPEM1Q8N4L4 309 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 MAB21L3Q8N8X9 362 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 MRPS31Q92665 395 aaKnown RBP13.56□□□□□ -0.24
KDM3B-206ENST00000509468 HPDLQ96IR7 371 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 TMLHEQ9NVH6 421 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
KDM3B-206ENST00000509468 NCDNQ9UBB6 729 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 GTF3C4Q9UKN8 822 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 CFAP45Q9UL16 551 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 L1RE1Q9UN81 338 aa13.56□□□□□ -0.24
KDM3B-206ENST00000509468 KIF26AQ9ULI4 1882 aaPredicted RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 SLC38A8A6NNN8 435 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 GABRDO14764 452 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 FAM163BP0C2L3 166 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 ZSCAN22P10073 491 aaPredicted RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 CYP2F1P24903 491 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 CTHP32929 405 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 HOXD13P35453 343 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 MAPRE1Q15691 268 aaKnown RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 SOWAHAQ2M3V2 549 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 ITPRIPL2Q3MIP1 535 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 CFAP221Q4G0U5 840 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 FAM26FQ5R3K3 315 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 CC2D1AQ6P1N0 951 aaPredicted RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 SHC4Q6S5L8 630 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 C4orf50Q6ZRC1 276 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 UNC13DQ70J99 1090 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 MON1AQ86VX9 555 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 WDR49Q8IV35 697 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 HSCBQ8IWL3 235 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 ADGRF2Q8IZF7 708 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 FSIP1Q8NA03 581 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 HPS3Q969F9 1004 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 MYRFLQ96LU7 910 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 EPC1Q9H2F5 836 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 KIF9Q9HAQ2 790 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 GKN1Q9NS71 199 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 TDP1Q9NUW8 608 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 MAGEC2Q9UBF1 373 aaPredicted RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 MAGED2Q9UNF1 606 aaPredicted RBP13.55□□□□□ -0.24
KDM3B-206ENST00000509468 NCANO14594 1321 aa13.55□□□□□ -0.24
KDM3B-206ENST00000509468 PVALEFA0A1B0GWK0 134 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 NOL4O94818 638 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 TNNI1P19237 187 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 SDHBP21912 280 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 ACAT1P24752 427 aaKnown RBP13.54□□□□□ -0.24
KDM3B-206ENST00000509468 ME1P48163 572 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 SNRNP35Q16560 246 aaKnown RBP13.54□□□□□ -0.24
KDM3B-206ENST00000509468 DDR2Q16832 855 aa13.54□□□□□ -0.24
KDM3B-206ENST00000509468 FAM171BQ6P995 826 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms