RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 PAX3P23760 479 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 CYP2F1P24903 491 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 LMO2P25791 158 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 POLR2BP30876 1174 aaKnown RBP11.32□□□□□ -0.6
SIL1-210ENST00000508639 HOXA6P31267 233 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 TUFMP49411 452 aaKnown RBP11.32□□□□□ -0.6
SIL1-210ENST00000508639 KPNA1P52294 538 aaPredicted RBP11.32□□□□□ -0.6
SIL1-210ENST00000508639 DDR2Q16832 855 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 GAB4Q2WGN9 574 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 TMEM196Q5HYL7 178 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 L1TD1Q5T7N2 865 aaKnown RBP11.32□□□□□ -0.6
SIL1-210ENST00000508639 LMBRD2Q68DH5 695 aaPredicted RBP11.32□□□□□ -0.6
SIL1-210ENST00000508639 LAIR1Q6GTX8 287 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 SLFN12LQ6IEE8 588 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 BRSK2Q8IWQ3 736 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 OR5B17Q8NGF7 314 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 CSGALNACT1Q8TDX6 532 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 POMGNT1Q8WZA1 660 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 USP28Q96RU2 1077 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 FAM213AQ9BRX8 229 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 IER2Q9BTL4 223 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 EBF3Q9H4W6 596 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 PCIF1Q9H4Z3 704 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 PDE11AQ9HCR9 933 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 TMEM30AQ9NV96 361 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 ABI2Q9NYB9 513 aaPredicted RBP11.32□□□□□ -0.6
SIL1-210ENST00000508639 GCNT4Q9P109 453 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 AGAP1Q9UPQ3 857 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.32□□□□□ -0.6
SIL1-210ENST00000508639 GTF3C3Q9Y5Q9 886 aa11.32□□□□□ -0.6
SIL1-210ENST00000508639 TRDMT1O14717 391 aaKnown RBP11.31□□□□□ -0.6
SIL1-210ENST00000508639 TBCAO75347 108 aaKnown RBP11.31□□□□□ -0.6
SIL1-210ENST00000508639 EGFP01133 1207 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 ITGB3P05106 788 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 KRT18P05783 430 aaKnown RBP11.31□□□□□ -0.6
SIL1-210ENST00000508639 RETP07949 1114 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 SYT1P21579 422 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 GALK1P51570 392 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 NRLP54845 237 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 CEBPZQ03701 1054 aaKnown RBP11.31□□□□□ -0.6
SIL1-210ENST00000508639 SIM2Q14190 667 aaPredicted RBP11.31□□□□□ -0.6
SIL1-210ENST00000508639 SOWAHAQ2M3V2 549 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 DGKKQ5KSL6 1271 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 MON1AQ86VX9 555 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 WDR5BQ86VZ2 330 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 YAF2Q8IY57 180 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 FAM160A2Q8N612 972 aaPredicted RBP11.31□□□□□ -0.6
SIL1-210ENST00000508639 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
SIL1-210ENST00000508639 SPPL2BQ8TCT7 592 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 KBTBD7Q8WVZ9 684 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 MYRFLQ96LU7 910 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 LINC00597Q9H2U6 94 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 CRTAC1Q9NQ79 661 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 SEMA4GQ9NTN9 838 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 GDAP2Q9NXN4 497 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 USP18Q9UMW8 372 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 MTMR6Q9Y217 621 aa11.31□□□□□ -0.6
SIL1-210ENST00000508639 FRYQ5TBA9 3013 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 PRPF40AO75400 957 aaKnown RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 KRT37O76014 449 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 NOL4O94818 638 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 IL18RAPO95256 599 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 BMP15O95972 392 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 CDC25CP30307 473 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 RAP1GAPP47736 663 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 MCM2P49736 904 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 USP46P62068 366 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 MESP2Q0VG99 397 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 RUNX3Q13761 415 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 SLC39A14Q15043 492 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 CCDC6Q16204 474 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 E2F4Q16254 413 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 INTS6LQ5JSJ4 861 aaKnown RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 RRAGBQ5VZM2 374 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 PRR23BQ6ZRT6 265 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 GPR161Q8N6U8 529 aaKnown RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 FAM200AQ8TCP9 573 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 C2orf15Q8WU43 125 aaKnown RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 LEO1Q8WVC0 666 aaPredicted RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 HVCN1Q96D96 273 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 MSANTD3Q96H12 275 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 ACBD6Q9BR61 282 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 MRPL44Q9H9J2 332 aaKnown RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 OLFML3Q9NRN5 406 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 DSEQ9UL01 958 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 PCDHB5Q9Y5E4 795 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 MORC2Q9Y6X9 1032 aaPredicted RBP11.3□□□□□ -0.6
SIL1-210ENST00000508639 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
SIL1-210ENST00000508639 ZFHX4Q86UP3 3567 aa11.29□□□□□ -0.6
SIL1-210ENST00000508639 HELZP42694 1942 aaKnown RBP11.29□□□□□ -0.6
SIL1-210ENST00000508639 VPS37CA5D8V6 355 aaPredicted RBP11.29□□□□□ -0.6
SIL1-210ENST00000508639 C2orf78A6NCI8 922 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms