RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 C5orf34Q96MH7 638 aa4.11□□□□□ -1.75
GYPB-209ENST00000508618 DMRTA2Q96SC8 542 aa4.11□□□□□ -1.75
GYPB-209ENST00000508618 BRD9Q9H8M2 597 aa4.11□□□□□ -1.75
GYPB-209ENST00000508618 PCDHA13Q9Y5I0 950 aa4.11□□□□□ -1.75
GYPB-209ENST00000508618 CCDC187A0A096LP49 1063 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 ZNF785A8K8V0 405 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 F2RL2O00254 374 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 HTRA2O43464 458 aaPredicted RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 GJB1P08034 283 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 CHRM5P08912 532 aaPredicted RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 FTH1P19P0C7X4 201 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 RARBP10826 455 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 TOB1P50616 345 aaPredicted RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 ZNF135P52742 658 aaPredicted RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 CYP4F2P78329 520 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 VPS53Q5VIR6 699 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 KIAA1161Q6NSJ0 714 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 SLC4A10Q6U841 1118 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 SLC30A10Q6XR72 485 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 MEPCEQ7L2J0 689 aaKnown RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 MAVSQ7Z434 540 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 NSMCE1Q8WV22 266 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 RITA1Q96K30 269 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 CLPTM1LQ96KA5 538 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 PDGFCQ9NRA1 345 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 TRNAU1APQ9NX07 287 aaKnown RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 CFAP20Q9Y6A4 193 aaKnown RBP4.1□□□□□ -1.75
GYPB-209ENST00000508618 WDR17Q8IZU2 1322 aa4.1□□□□□ -1.75
GYPB-209ENST00000508618 LY6G6EA0A0G2JKS1 128 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 PPM1DO15297 605 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 NPSP0C0P6 89 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 MALP21145 153 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 CYP2C18P33260 490 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 SRSF1Q07955 248 aaKnown RBP eCLIP4.09□□□□□ -1.75
GYPB-209ENST00000508618 CT47A1Q5JQC4 288 aaPredicted RBP4.09□□□□□ -1.75
GYPB-209ENST00000508618 PCID2Q5JVF3 399 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 RNF219Q5W0B1 726 aaPredicted RBP4.09□□□□□ -1.75
GYPB-209ENST00000508618 LHFPL2Q6ZUX7 228 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 CNGA4Q8IV77 575 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 NANOGP1Q8N7R0 232 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 PPM1NQ8N819 430 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 C16orf52Q8NHV5 167 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 CYP2W1Q8TAV3 490 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 FAM118BQ9BPY3 351 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 ADAMTS5Q9UNA0 930 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 RAD54BQ9Y620 910 aa4.09□□□□□ -1.75
GYPB-209ENST00000508618 TMEM191BP0C7N4 346 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 EDNRBP24530 442 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 PPIFP30405 207 aaKnown RBP4.08□□□□□ -1.76
GYPB-209ENST00000508618 LIPAP38571 399 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 GCLCP48506 637 aaPredicted RBP4.08□□□□□ -1.76
GYPB-209ENST00000508618 PSMC1P62191 440 aaKnown RBP4.08□□□□□ -1.76
GYPB-209ENST00000508618 KIF22Q14807 665 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 C3orf36Q3SXR2 165 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 CERKLQ49MI3 558 aaPredicted RBP4.08□□□□□ -1.76
GYPB-209ENST00000508618 ICE2Q659A1 982 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 MIS18BP1Q6P0N0 1132 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 KIRREL2Q6UWL6 708 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 TTC7BQ86TV6 843 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 NRACQ8N912 160 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 WDR66Q8TBY9 1149 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 COG1Q8WTW3 980 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 DDX17Q92841 729 aaKnown RBP4.08□□□□□ -1.76
GYPB-209ENST00000508618 DAZAP1Q96EP5 407 aaKnown RBP4.08□□□□□ -1.76
GYPB-209ENST00000508618 CAMKK2Q96RR4 588 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 LIMCH1Q9UPQ0 1083 aa4.08□□□□□ -1.76
GYPB-209ENST00000508618 FAM90A8PA6NJQ4 464 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 POC1B-GALNT4F8VUJ3 575 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 PDHA1P08559 390 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 VIL1P09327 827 aaKnown RBP4.07□□□□□ -1.76
GYPB-209ENST00000508618 FAM90A13PP0C7W8 464 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 FAM90A24PP0C7X0 464 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 C5AR1P21730 350 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 ATP5F1P24539 256 aaPredicted RBP4.07□□□□□ -1.76
GYPB-209ENST00000508618 PIK3CGP48736 1102 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 THBS3P49746 956 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 KRT85P78386 507 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 IL10RAQ13651 578 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 LRRC41Q15345 812 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 INAVAQ3KP66 663 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 TREML2Q5T2D2 321 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 MTHFD1LQ6UB35 978 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 DLK2Q6UY11 383 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 IRF2BP2Q7Z5L9 587 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 GALNT4Q8N4A0 578 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 JADE3Q92613 823 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 SLKQ9H2G2 1235 aaPredicted RBP4.07□□□□□ -1.76
GYPB-209ENST00000508618 MRPS18AQ9NVS2 196 aaKnown RBP4.07□□□□□ -1.76
GYPB-209ENST00000508618 ZDHHC8Q9ULC8 765 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 SCAF8Q9UPN6 1271 aaKnown RBP4.07□□□□□ -1.76
GYPB-209ENST00000508618 TBX22Q9Y458 520 aa4.07□□□□□ -1.76
GYPB-209ENST00000508618 PRSS29PA6NIE9 313 aa4.06□□□□□ -1.76
GYPB-209ENST00000508618 ENGP17813 658 aa4.06□□□□□ -1.76
GYPB-209ENST00000508618 CHRM3P20309 590 aa4.06□□□□□ -1.76
GYPB-209ENST00000508618 SCP2P22307 547 aa4.06□□□□□ -1.76
GYPB-209ENST00000508618 CLCN2P51788 898 aa4.06□□□□□ -1.76
GYPB-209ENST00000508618 C10orf25Q5T742 122 aa4.06□□□□□ -1.76
GYPB-209ENST00000508618 MEX3CQ5U5Q3 659 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms