RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SMARCD2Q92925 531 aa21.27■■□□□ 1
SFXN1-209ENST00000508290 MCRS1Q96EZ8 462 aa21.27■■□□□ 1
SFXN1-209ENST00000508290 SYT15Q9BQS2 421 aa21.27■■□□□ 1
SFXN1-209ENST00000508290 LRRC3Q9BY71 257 aa21.27■■□□□ 1
SFXN1-209ENST00000508290 IMPG2Q9BZV3 1241 aa21.27■■□□□ 1
SFXN1-209ENST00000508290 MFSD1Q9H3U5 465 aa21.27■■□□□ 1
SFXN1-209ENST00000508290 TRPV4Q9HBA0 871 aa21.27■■□□□ 1
SFXN1-209ENST00000508290 PSMA7O14818 248 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 CSH1P0DML2 217 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 CSH2P0DML3 217 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 ATF6P18850 670 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 TRIM21P19474 475 aaKnown RBP21.26■□□□□ 0.99
SFXN1-209ENST00000508290 GNL1P36915 607 aaPredicted RBP21.26■□□□□ 0.99
SFXN1-209ENST00000508290 PRCPP42785 496 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 FKBP3Q00688 224 aaKnown RBP21.26■□□□□ 0.99
SFXN1-209ENST00000508290 FOXR2Q6PJQ5 311 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 VSTM1Q6UX27 236 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 SV2AQ7L0J3 742 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 OSTM1Q86WC4 334 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 TTC9BQ8N6N2 239 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 ZFP14Q9HCL3 533 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 EHD2Q9NZN4 543 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 UXTQ9UBK9 157 aaPredicted RBP21.26■□□□□ 0.99
SFXN1-209ENST00000508290 GTF3C4Q9UKN8 822 aa21.26■□□□□ 0.99
SFXN1-209ENST00000508290 DOCK8Q8NF50 2099 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 SLC16A3O15427 465 aaKnown RBP21.25■□□□□ 0.99
SFXN1-209ENST00000508290 EPB41P11171 864 aaKnown RBP21.25■□□□□ 0.99
SFXN1-209ENST00000508290 ACAT1P24752 427 aaKnown RBP21.25■□□□□ 0.99
SFXN1-209ENST00000508290 CCR2P41597 374 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 CLCN5P51795 746 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 HS6ST3Q8IZP7 471 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 ADSSL1Q8N142 457 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 CCDC150Q8NCX0 1101 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 SHKBP1Q8TBC3 707 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 DEPDC1BQ8WUY9 529 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 TCEAL4Q96EI5 215 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 DHTKD1Q96HY7 919 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-209ENST00000508290 FAXDC2Q96IV6 333 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 SHDQ96IW2 340 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 ASB16Q96NS5 453 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 DNAI2Q9GZS0 605 aa21.25■□□□□ 0.99
SFXN1-209ENST00000508290 NXF1Q9UBU9 619 aaKnown RBP21.25■□□□□ 0.99
SFXN1-209ENST00000508290 MOSPD3O75425 235 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 CLSTN1O94985 981 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 DDX6P26196 483 aaKnown RBP eCLIP21.24■□□□□ 0.99
SFXN1-209ENST00000508290 WEE1P30291 646 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 DLG4P78352 724 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 SCARA3Q6AZY7 606 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 SMYD4Q8IYR2 804 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-209ENST00000508290 OR6B3Q8NGW1 331 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 MYCBPAPQ8TBZ2 947 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 TRMT2BQ96GJ1 504 aaKnown RBP21.24■□□□□ 0.99
SFXN1-209ENST00000508290 TNIP3Q96KP6 325 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 PI4K2AQ9BTU6 479 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 SMOC2Q9H3U7 446 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 SLITRK6Q9H5Y7 841 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 TMLHEQ9NVH6 421 aa21.24■□□□□ 0.99
SFXN1-209ENST00000508290 MAGEC2Q9UBF1 373 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-209ENST00000508290 A0A1W2PRU2 124 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 MYBPHLA2RUH7 354 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 NARSO43776 548 aaKnown RBP21.23■□□□□ 0.99
SFXN1-209ENST00000508290 ASS1P00966 412 aaKnown RBP21.23■□□□□ 0.99
SFXN1-209ENST00000508290 GABRR2P28476 465 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 PIK3CAP42336 1068 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 FAM78AQ5JUQ0 283 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 ZC3H3Q8IXZ2 948 aaKnown RBP21.23■□□□□ 0.99
SFXN1-209ENST00000508290 TRIML1Q8N9V2 468 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 ZSCAN18Q8TBC5 510 aaPredicted RBP21.23■□□□□ 0.99
SFXN1-209ENST00000508290 MRPL45Q9BRJ2 306 aaKnown RBP21.23■□□□□ 0.99
SFXN1-209ENST00000508290 ATXN3LQ9H3M9 355 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 TMEM8AQ9HCN3 771 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 TRIOO75962 3097 aa21.23■□□□□ 0.99
SFXN1-209ENST00000508290 A8MXQ7 604 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 GADD45BO75293 160 aaPredicted RBP21.22■□□□□ 0.99
SFXN1-209ENST00000508290 SOAT2O75908 522 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 VNN1O95497 513 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 CFHP08603 1231 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 LMO2P25791 158 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 TEAD2Q15562 447 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 C1orf220Q5T0J3 134 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 KRT39Q6A163 491 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 ASTLQ6HA08 431 aaPredicted RBP21.22■□□□□ 0.99
SFXN1-209ENST00000508290 SIX5Q8N196 739 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 GPR152Q8TDT2 470 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 DNASE1L2Q92874 299 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 SPATA17Q96L03 361 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 MYRFLQ96LU7 910 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 KXD1Q9BQD3 176 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 LPIN3Q9BQK8 851 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 ELOVL4Q9GZR5 314 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 FAM124BQ9H5Z6 455 aaPredicted RBP21.22■□□□□ 0.99
SFXN1-209ENST00000508290 ARHGEF3Q9NR81 526 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 OBP2AQ9NY56 170 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 NOTCH4Q99466 2003 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 ATP8B3O60423 1300 aa21.22■□□□□ 0.99
SFXN1-209ENST00000508290 BICDL2A1A5D9 508 aa21.21■□□□□ 0.99
SFXN1-209ENST00000508290 TRIM66O15016 1216 aa21.21■□□□□ 0.99
SFXN1-209ENST00000508290 NOL4O94818 638 aa21.21■□□□□ 0.99
SFXN1-209ENST00000508290 FCARP24071 287 aa21.21■□□□□ 0.99
SFXN1-209ENST00000508290 CCNE1P24864 410 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms