RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 NOP58Q9Y2X3 529 aaKnown RBP4.85□□□□□ -1.63
CBX3P3-201ENST00000508108 AOX1Q06278 1338 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 WIPF3A6NGB9 483 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 DNAJC9-AS1A6NH13 148 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 CGB1A6NKQ9 187 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 EIF5BO60841 1220 aaKnown RBP4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 DNAJB5O75953 348 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 ALDH2P05091 517 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 PRKCGP05129 697 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 JUPP14923 745 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 PCSK6P29122 969 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 LILRA4P59901 499 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 LONRF3Q496Y0 759 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 ZNF618Q5T7W0 954 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 TEDDM1Q5T9Z0 273 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 MAVSQ7Z434 540 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 HPS3Q969F9 1004 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 CDK5RAP3Q96JB5 506 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 CGRRF1Q99675 332 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 BRINP2Q9C0B6 783 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 SERTAD4Q9NUC0 356 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 RNF7Q9UBF6 113 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 CPA4Q9UI42 421 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 SERTAD3Q9UJW9 196 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 STXBP5LQ9Y2K9 1186 aa4.84□□□□□ -1.63
CBX3P3-201ENST00000508108 DCLK1O15075 740 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 OFD1O75665 1012 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 GRPP07492 148 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 ATXN1LP0C7T5 689 aaKnown RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 PXNP49023 591 aaPredicted RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 ALDH9A1P49189 494 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 LOXL3P58215 753 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 SP2Q02086 613 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 HNRNPA0Q13151 305 aaKnown RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 ZNF267Q14586 743 aaPredicted RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 IQCB1Q15051 598 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 AMOTQ4VCS5 1084 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 ARHGAP40Q5TG30 622 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 ICE2Q659A1 982 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 SFRP4Q6FHJ7 346 aaPredicted RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 MTFMTQ96DP5 389 aaKnown RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 NELL2Q99435 816 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 NUP88Q99567 741 aaPredicted RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 CHMP4AQ9BY43 222 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 METTL14Q9HCE5 456 aaKnown RBP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 TCF7L1Q9HCS4 588 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 SH3BP4Q9P0V3 963 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 STAP2Q9UGK3 403 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 ANKRD6Q9Y2G4 727 aa4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.83□□□□□ -1.64
CBX3P3-201ENST00000508108 SETD1BQ9UPS6 1966 aaKnown RBP4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 INO80B-WBP1J3KQ70 363 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 SLC16A3O15427 465 aaKnown RBP4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 FAM163BP0C2L3 166 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 LIPAP38571 399 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 IGBP1P78318 339 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 SRSF7Q16629 238 aaKnown RBP eCLIP4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 ATAT1Q5SQI0 421 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 TREML2Q5T2D2 321 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 EMC10Q5UCC4 262 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 CEP85Q6P2H3 762 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 PLBD2Q8NHP8 589 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 INO80BQ9C086 356 aaPredicted RBP4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 CNNM1Q9NRU3 951 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 SERGEFQ9UGK8 458 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 PLEKHM1Q9Y4G2 1056 aa4.82□□□□□ -1.64
CBX3P3-201ENST00000508108 hCG_2014768A0A024R1R8 64 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 LINC01548A6NM66 108 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 TARM1B6A8C7 271 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 H0YIZ8 118 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 QSOX1O00391 747 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 AP1G1O43747 822 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 TLR5O60602 858 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 ALDH1L1O75891 902 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 CYP2C18P33260 490 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 ANAPC15P60006 121 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 TFF2Q03403 129 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 SLC10A2Q12908 348 aaPredicted RBP4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 GRM1Q13255 1194 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 LLGL1Q15334 1064 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 EZH2Q15910 746 aaKnown RBP4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 RGS7BPQ6MZT1 257 aaPredicted RBP4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 ZNF782Q6ZMW2 699 aaPredicted RBP4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 SLC29A4Q7RTT9 530 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 DTX2Q86UW9 622 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 FANCBQ8NB91 859 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 C1GALT1C1Q96EU7 318 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 LRGUKQ96M69 825 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 SSX2IPQ9Y2D8 614 aa4.81□□□□□ -1.64
CBX3P3-201ENST00000508108 ARID4BQ4LE39 1312 aaPredicted RBP4.8□□□□□ -1.64
CBX3P3-201ENST00000508108 WDR91A4D1P6 747 aa4.8□□□□□ -1.64
CBX3P3-201ENST00000508108 SMIM22K7EJ46 135 aa4.8□□□□□ -1.64
CBX3P3-201ENST00000508108 JTBO76095 146 aa4.8□□□□□ -1.64
CBX3P3-201ENST00000508108 ABLIM3O94929 683 aa4.8□□□□□ -1.64
CBX3P3-201ENST00000508108 ERBB2P04626 1255 aa4.8□□□□□ -1.64
CBX3P3-201ENST00000508108 FESP07332 822 aa4.8□□□□□ -1.64
CBX3P3-201ENST00000508108 CELA2AP08217 269 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms