RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 ARHGAP29Q52LW3 1261 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 INTS6LQ5JSJ4 861 aaKnown RBP22.37■■□□□ 1.17
CLDND1-216ENST00000507944 FAM26FQ5R3K3 315 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 EPM2AIP1Q7L775 607 aaPredicted RBP22.37■■□□□ 1.17
CLDND1-216ENST00000507944 TOP6BLQ8N6T0 577 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 OR5B17Q8NGF7 314 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 SPATA18Q8TC71 538 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 LEO1Q8WVC0 666 aaPredicted RBP22.37■■□□□ 1.17
CLDND1-216ENST00000507944 ATRIPQ8WXE1 791 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 SLC46A2Q9BY10 475 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 CHRDQ9H2X0 955 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 C8orf33Q9H7E9 229 aaPredicted RBP22.37■■□□□ 1.17
CLDND1-216ENST00000507944 KIAA1586Q9HCI6 787 aa22.37■■□□□ 1.17
CLDND1-216ENST00000507944 PTPRJQ12913 1337 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 PRAMEF12O95522 483 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 HMGA1P17096 107 aaKnown RBP22.36■■□□□ 1.17
CLDND1-216ENST00000507944 LHX1P48742 406 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 GPR15P49685 360 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 MYO1EQ12965 1108 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 TSSK4Q6SA08 328 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 UNC13DQ70J99 1090 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 OSTM1Q86WC4 334 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 ADGRF2Q8IZF7 708 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 BPIFB1Q8TDL5 484 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 MSANTD3Q96H12 275 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 ZFYVE19Q96K21 471 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 MAGEF1Q9HAY2 307 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 PRMT8Q9NR22 394 aaPredicted RBP22.36■■□□□ 1.17
CLDND1-216ENST00000507944 ZSCAN32Q9NX65 697 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 FAM13BQ9NYF5 915 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 ZMYM5Q9UJ78 669 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 GTF3C4Q9UKN8 822 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 PCDHA7Q9UN72 937 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 PCDHGA2Q9Y5H1 932 aa22.36■■□□□ 1.17
CLDND1-216ENST00000507944 SLC38A8A6NNN8 435 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 GABRDO14764 452 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 F11P03951 625 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 CSH1P0DML2 217 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 CSH2P0DML3 217 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 CYP2F1P24903 491 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 ME1P48163 572 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 SOX9P48436 509 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 NLRP12P59046 1061 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 DDR2Q16832 855 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 SOWAHAQ2M3V2 549 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 SDHAF4Q5VUM1 108 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 ATL3Q6DD88 541 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 C1orf228Q6PIY5 440 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 MAMSTRQ6ZN01 415 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 DPH6Q7L8W6 267 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 TMEM150AQ86TG1 271 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 CELF5Q8N6W0 485 aaKnown RBP22.35■■□□□ 1.17
CLDND1-216ENST00000507944 SUMF1Q8NBK3 374 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 NELL1Q92832 810 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 HPDLQ96IR7 371 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 PKMYT1Q99640 499 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 IER2Q9BTL4 223 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 SMG9Q9H0W8 520 aaKnown RBP22.35■■□□□ 1.17
CLDND1-216ENST00000507944 BLZF1Q9H2G9 400 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 ABCB6Q9NP58 842 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 AGPAT3Q9NRZ7 376 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 ZNF292O60281 2723 aa22.35■■□□□ 1.17
CLDND1-216ENST00000507944 TGFB1I1O43294 461 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 CHRNB1P11230 501 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 PCSK1P29120 753 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 CASP1P29466 404 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 RPL10AP62906 217 aaKnown RBP22.34■■□□□ 1.17
CLDND1-216ENST00000507944 EHHADHQ08426 723 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 WDR49Q8IV35 697 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 CMTM8Q8IZV2 173 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 RDH13Q8NBN7 331 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 ZBTB44Q8NCP5 570 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 TTC8Q8TAM2 541 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 SCFD1Q8WVM8 642 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 HINFPQ9BQA5 517 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 THG1LQ9NWX6 298 aaKnown RBP22.34■■□□□ 1.17
CLDND1-216ENST00000507944 GTSE1Q9NYZ3 720 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 CFAP45Q9UL16 551 aa22.34■■□□□ 1.17
CLDND1-216ENST00000507944 MAGED2Q9UNF1 606 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-216ENST00000507944 WDR87Q6ZQQ6 2873 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 MYBPHLA2RUH7 354 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 CLIC2O15247 247 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 HCRTO43612 131 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 DDX6P26196 483 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLDND1-216ENST00000507944 SNRPFP62306 86 aaKnown RBP22.33■■□□□ 1.17
CLDND1-216ENST00000507944 PLCB2Q00722 1185 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 PKP1Q13835 747 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 SNRNP35Q16560 246 aaKnown RBP22.33■■□□□ 1.17
CLDND1-216ENST00000507944 RESP18Q5W5W9 173 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 LIMS2Q7Z4I7 341 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 RALGPS2Q86X27 583 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-216ENST00000507944 SPATA2LQ8IUW3 424 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-216ENST00000507944 NELFCDQ8IXH7 590 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 MAB21L3Q8N8X9 362 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 SPRYD3Q8NCJ5 442 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 STKLD1Q8NE28 680 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 RUBCNQ92622 972 aa22.33■■□□□ 1.17
CLDND1-216ENST00000507944 FAM126AQ9BYI3 521 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-216ENST00000507944 UBE4BO95155 1302 aa22.32■■□□□ 1.16
CLDND1-216ENST00000507944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 540 ms