RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 RBM23Q86U06 439 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 LRRTM3Q86VH5 581 aa14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 NEK11Q8NG66 645 aa14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 SLC22A17Q8WUG5 538 aa14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 ELOVL4Q9GZR5 314 aa14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 DPEP3Q9H4B8 488 aa14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-221ENST00000507845 WDR27A2RRH5 827 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 ABLIM3O94929 683 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 TPM3P06753 285 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 CPB1P15086 417 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 PTPN1P18031 435 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 RFX1P22670 979 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 GTF2F1P35269 517 aaKnown RBP eCLIP14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 CLCN4P51793 760 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 PSMC1P62191 440 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 HYAL1Q12794 435 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 GPR17Q13304 367 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 ORC1Q13415 861 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 ARHGAP44Q17R89 818 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 CCDC142Q17RM4 750 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 FAM171BQ6P995 826 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 LILRA6Q6PI73 481 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 ACOT1Q86TX2 421 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 PALB2Q86YC2 1186 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 DCP1BQ8IZD4 617 aaKnown RBP14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 CRYBG2Q8N1P7 616 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 B3GALNT2Q8NCR0 500 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 SHC3Q92529 594 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 PPP2R3CQ969Q6 453 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 CDCA3Q99618 268 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 LPIN3Q9BQK8 851 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 NT5C1AQ9BXI3 368 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 CRTAC1Q9NQ79 661 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 TMLHEQ9NVH6 421 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 CNTN6Q9UQ52 1028 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 DAAM1Q9Y4D1 1078 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 PCDHB4Q9Y5E5 795 aa14.35□□□□□ -0.11
UBE2D3-221ENST00000507845 MYBPHLA2RUH7 354 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 TGM5O43548 720 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 VNN2O95498 520 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 C1RP00736 705 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 FOSL2P15408 326 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 ZNF132P52740 706 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 RAD23BP54727 409 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 SLC39A12Q504Y0 691 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 ZNF394Q53GI3 561 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 MDH1BQ5I0G3 518 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 TPGS2Q68CL5 300 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 TMEM270Q6UE05 265 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 RNF19BQ6ZMZ0 732 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 PPFIBP1Q86W92 1011 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 SLC4A11Q8NBS3 891 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 ZNF461Q8TAF7 563 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 MYCBPAPQ8TBZ2 947 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 TNIP3Q96KP6 325 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 GPR88Q9GZN0 384 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 AFF4Q9UHB7 1163 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 GTF3C4Q9UKN8 822 aa14.34□□□□□ -0.11
UBE2D3-221ENST00000507845 MTMR11A4FU01 709 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 RNF225M0QZC1 329 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 FOXN3O00409 490 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 GLUD1P00367 558 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 KRT5P13647 590 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 EPCAMP16422 314 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 JAM2P57087 298 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 RAPGEF1Q13905 1077 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 KCNC3Q14003 757 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 DRAP1Q14919 205 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 SMYD5Q6GMV2 418 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 MICALL1Q8N3F8 863 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 RBBP8NLQ8NC74 664 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 VN1R2Q8NFZ6 395 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 TMEM176AQ96HP8 235 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 PGLYRP2Q96PD5 576 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 STK33Q9BYT3 514 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 TTYH3Q9C0H2 523 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 IGFLR1Q9H665 355 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 NLRC4Q9NPP4 1024 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 CEP72Q9P209 647 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 HCFC2Q9Y5Z7 792 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 ITIH6Q6UXX5 1313 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 GREB1Q4ZG55 1949 aa14.33□□□□□ -0.12
UBE2D3-221ENST00000507845 DOCK6Q96HP0 2047 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 FSD2A1L4K1 749 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 F8VZ95 297 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 SEC24AO95486 1093 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 GLP2RO95838 553 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 PAEPP09466 180 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 SPATA31D3P0C874 917 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 ATF2P15336 505 aa14.32□□□□□ -0.12
UBE2D3-221ENST00000507845 TRIM21P19474 475 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms