RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 SLC5A9Q2M3M2 681 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 ZACNQ401N2 412 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 TCERG1LQ5VWI1 586 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 HFE2Q6ZVN8 426 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 SV2AQ7L0J3 742 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 LRRTM3Q86VH5 581 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 SCN4BQ8IWT1 228 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 FBXL6Q8N531 539 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 GIPC2Q8TF65 315 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 RSAD2Q8WXG1 361 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 E2F7Q96AV8 911 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 TNIP3Q96KP6 325 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 ZFP14Q9HCL3 533 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 C11orf16Q9NQ32 467 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 UXTQ9UBK9 157 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-211ENST00000507689 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
COL1A1-211ENST00000507689 A0A1W2PRU2 124 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 DPYSL4O14531 572 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 VNN2O95498 520 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 GABRR2P28476 465 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 GRIK1P39086 918 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 GCLMP48507 274 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 CDR1P51861 262 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 EPHA5P54756 1037 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 PSMC1P62191 440 aaKnown RBP16.7■□□□□ 0.26
COL1A1-211ENST00000507689 DLG4P78352 724 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 ZCWPW2Q504Y3 356 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 DCAF17Q5H9S7 520 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-211ENST00000507689 WDR44Q5JSH3 913 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 PRSS36Q5K4E3 855 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 PARM1Q6UWI2 310 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 OSTM1Q86WC4 334 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 ADSSL1Q8N142 457 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 TTC9BQ8N6N2 239 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 PLEKHO2Q8TD55 490 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 TCEAL4Q96EI5 215 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 KXD1Q9BQD3 176 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 CRISPLD1Q9H336 500 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 METTL14Q9HCE5 456 aaKnown RBP16.7■□□□□ 0.26
COL1A1-211ENST00000507689 TMEM8AQ9HCN3 771 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 WNT16Q9UBV4 365 aa16.7■□□□□ 0.26
COL1A1-211ENST00000507689 MAGED2Q9UNF1 606 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-211ENST00000507689 TSC2P49815 1807 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 BIN1O00499 593 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 ECI2O75521 394 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 FGFR1OPO95684 399 aaKnown RBP16.69■□□□□ 0.26
COL1A1-211ENST00000507689 HLA-DRAP01903 254 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 CFHP08603 1231 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 TRIM49P0CI25 452 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 TRIM49CP0CI26 452 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 CCNE1P24864 410 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 CYP2F1P24903 491 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 TEAD2Q15562 447 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 CCDC40Q4G0X9 1142 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 KRT39Q6A163 491 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 ANKRD40Q6AI12 368 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 VSTM1Q6UX27 236 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 SCARA5Q6ZMJ2 495 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 YAF2Q8IY57 180 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 TRIML1Q8N9V2 468 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 MYCBPAPQ8TBZ2 947 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 KBTBD7Q8WVZ9 684 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 FGF14Q92915 247 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 SMARCD2Q92925 531 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 ELSPBP1Q96BH3 223 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 SHDQ96IW2 340 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 PRRX2Q99811 253 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 MRPL45Q9BRJ2 306 aaKnown RBP16.69■□□□□ 0.26
COL1A1-211ENST00000507689 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 DNAJC25Q9H1X3 360 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 TMLHEQ9NVH6 421 aa16.69■□□□□ 0.26
COL1A1-211ENST00000507689 ARMCX3Q9UH62 379 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-211ENST00000507689 MYBPHLA2RUH7 354 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 TRIM66O15016 1216 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 PTPN1P18031 435 aaKnown RBP16.68■□□□□ 0.26
COL1A1-211ENST00000507689 LMO2P25791 158 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 MAGEA11P43364 429 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 MXI1P50539 228 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 CETN1Q12798 172 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 CAMK4Q16566 473 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 GPR158Q5T848 1215 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 FAM171BQ6P995 826 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 SIX5Q8N196 739 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 FLCNQ8NFG4 579 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 SHKBP1Q8TBC3 707 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 ZSCAN18Q8TBC5 510 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-211ENST00000507689 MRPS31Q92665 395 aaKnown RBP16.68■□□□□ 0.26
COL1A1-211ENST00000507689 MYLPFQ96A32 169 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 ASIC4Q96FT7 647 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 EEF2KMTQ96G04 330 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 CEP295NLQ96MC4 621 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 CEP63Q96MT8 703 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 MED10Q9BTT4 135 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms