RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 HHIPQ96QV1 700 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 SEPT5Q99719 369 aaPredicted RBP17.79■□□□□ 0.44
SNF8-205ENST00000507302 P2RY13Q9BPV8 354 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 RPF1Q9H9Y2 349 aaKnown RBP17.79■□□□□ 0.44
SNF8-205ENST00000507302 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.79■□□□□ 0.44
SNF8-205ENST00000507302 SH2B1Q9NRF2 756 aaPredicted RBP17.79■□□□□ 0.44
SNF8-205ENST00000507302 LARSQ9P2J5 1176 aaKnown RBP17.79■□□□□ 0.44
SNF8-205ENST00000507302 THADAQ6YHU6 1953 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 FASNP49327 2511 aaKnown RBP17.78■□□□□ 0.44
SNF8-205ENST00000507302 C4orf47A7E2U8 309 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 CDX4O14627 284 aaPredicted RBP17.78■□□□□ 0.44
SNF8-205ENST00000507302 APBB3O95704 486 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 CEACAM1P13688 526 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 ARSAP15289 507 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 AVPR1AP37288 418 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 MGAT5BQ3V5L5 792 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 NAIF1Q69YI7 327 aaPredicted RBP17.78■□□□□ 0.44
SNF8-205ENST00000507302 SLC39A4Q6P5W5 647 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 MAB21L3Q8N8X9 362 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 ANKRD11Q6UB99 2663 aaPredicted RBP17.78■□□□□ 0.44
SNF8-205ENST00000507302 HELZP42694 1942 aaKnown RBP17.78■□□□□ 0.44
SNF8-205ENST00000507302 PLXND1Q9Y4D7 1925 aa17.78■□□□□ 0.44
SNF8-205ENST00000507302 NBEAQ8NFP9 2946 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 DCLK1O15075 740 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 TADA3O75528 432 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 NFICP08651 508 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 ZNF131P52739 623 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 POU5F1Q01860 360 aaKnown RBP17.77■□□□□ 0.44
SNF8-205ENST00000507302 RAD51AP2Q09MP3 1159 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 PMS2CLQ68D20 193 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 DTHD1Q6ZMT9 781 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 C11orf74Q86VG3 221 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 RASSF3Q86WH2 238 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 RPLP0P6Q8NHW5 317 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 GIPC2Q8TF65 315 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 MYRFLQ96LU7 910 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 ASB7Q9H672 318 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 ECT2Q9H8V3 914 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 ODF2LQ9ULJ1 636 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 C2CD2Q9Y426 696 aa17.77■□□□□ 0.44
SNF8-205ENST00000507302 ASCC3Q8N3C0 2202 aaKnown RBP17.77■□□□□ 0.44
SNF8-205ENST00000507302 ITPR1Q14643 2758 aa17.77■□□□□ 0.43
SNF8-205ENST00000507302 TCF3P15923 654 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 NMT1P30419 496 aaKnown RBP17.76■□□□□ 0.43
SNF8-205ENST00000507302 LIG4P49917 911 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 HMGN5P82970 282 aaKnown RBP17.76■□□□□ 0.43
SNF8-205ENST00000507302 CREB5Q02930 508 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 ZNF252P-AS1Q0IIN9 211 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 BFSP1Q12934 665 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 COL9A2Q14055 689 aaPredicted RBP17.76■□□□□ 0.43
SNF8-205ENST00000507302 DMC1Q14565 340 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 ZNF77Q15935 545 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 TMEM119Q4V9L6 283 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 SH3PXD2AQ5TCZ1 1133 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 DAB2IPQ5VWQ8 1189 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 TXNDC8Q6A555 127 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 LEO1Q8WVC0 666 aaPredicted RBP17.76■□□□□ 0.43
SNF8-205ENST00000507302 OSCP1Q8WVF1 389 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 EXOC4Q96A65 974 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 ACDQ96AP0 544 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 TRMT2BQ96GJ1 504 aaKnown RBP17.76■□□□□ 0.43
SNF8-205ENST00000507302 FIZ1Q96SL8 496 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 ADAM33Q9BZ11 813 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 LIMCH1Q9UPQ0 1083 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 STYXL1Q9Y6J8 313 aa17.76■□□□□ 0.43
SNF8-205ENST00000507302 PCNX2A6NKB5 2137 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 CYB561D2O14569 222 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 HNRNPDLO14979 420 aaKnown RBP17.75■□□□□ 0.43
SNF8-205ENST00000507302 PLA2G4BP0C869 781 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 CHRM1P11229 460 aaPredicted RBP17.75■□□□□ 0.43
SNF8-205ENST00000507302 HOXB3P14651 431 aaPredicted RBP17.75■□□□□ 0.43
SNF8-205ENST00000507302 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNF8-205ENST00000507302 USP4Q13107 963 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 TMEM132DQ14C87 1099 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 THEM5Q8N1Q8 247 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 CPA6Q8N4T0 437 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 CD101Q93033 1021 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 BICD1Q96G01 975 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 TMLHEQ9NVH6 421 aa17.75■□□□□ 0.43
SNF8-205ENST00000507302 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 NOL4O94818 638 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 CSH1P0DML2 217 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 CSH2P0DML3 217 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 TAF6P49848 677 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 ATP2C1P98194 919 aaPredicted RBP17.74■□□□□ 0.43
SNF8-205ENST00000507302 FAM160A1Q05DH4 1040 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 MTF1Q14872 753 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 EML3Q32P44 896 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 WSCD1Q658N2 575 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 CC2D1AQ6P1N0 951 aaPredicted RBP17.74■□□□□ 0.43
SNF8-205ENST00000507302 METTL23Q86XA0 190 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 DCP1BQ8IZD4 617 aaKnown RBP17.74■□□□□ 0.43
SNF8-205ENST00000507302 OLIG1Q8TAK6 271 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 MRPS31Q92665 395 aaKnown RBP17.74■□□□□ 0.43
SNF8-205ENST00000507302 PKMYT1Q99640 499 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 TMEM206Q9H813 350 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 ABCB6Q9NP58 842 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 TMEM9BQ9NQ34 198 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 EVLQ9UI08 416 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms