RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 L1RE1Q9UN81 338 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 MTF2Q9Y483 593 aaPredicted RBP15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 SNX9Q9Y5X1 595 aa15.49■□□□□ 0.07
HMGCS1-203ENST00000507004 FANCMQ8IYD8 2048 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 ARNTLO00327 626 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 GABRDO14764 452 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 POLR2DO15514 142 aaKnown RBP15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 LRRN2O75325 713 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 MYL1P05976 194 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 CD72P21854 359 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 AVPR1AP37288 418 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 CSTF1Q05048 431 aaKnown RBP15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 SPATA2LQ8IUW3 424 aaPredicted RBP15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 C12orf56Q8IXR9 622 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 CEP57L1Q8IYX8 460 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 ADGRF2Q8IZF7 708 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 MAML2Q8IZL2 1156 aaPredicted RBP15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 SYNPOQ8N3V7 929 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 TTC9BQ8N6N2 239 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 XXYLT1Q8NBI6 393 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 CXorf38Q8TB03 319 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 RUBCNQ92622 972 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 TRMT2BQ96GJ1 504 aaKnown RBP15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 HPDLQ96IR7 371 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 LPIN3Q9BQK8 851 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 MKNK1Q9BUB5 465 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 MTMR12Q9C0I1 747 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 IL21Q9HBE4 155 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 USP25Q9UHP3 1055 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 CDH9Q9ULB4 789 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 R4GN57 208 aa15.48■□□□□ 0.07
HMGCS1-203ENST00000507004 SOAT2O75908 522 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 PFKLP17858 780 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 MAGEA11P43364 429 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 PDE6CP51160 858 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 AP3M2P53677 418 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 EHHADHQ08426 723 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 ZNF268Q14587 947 aaPredicted RBP15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 SNRNP35Q16560 246 aaKnown RBP15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 BMT2Q1RMZ1 405 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 RESP18Q5W5W9 173 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 VSTM1Q6UX27 236 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 CMTM8Q8IZV2 173 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 FSIP1Q8NA03 581 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 ZBTB44Q8NCP5 570 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 NELL1Q92832 810 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 MYRFLQ96LU7 910 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 FGFBP2Q9BYJ0 223 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 LMAN1LQ9HAT1 526 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 AGPAT3Q9NRZ7 376 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 SIX4Q9UIU6 781 aa15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 NDRG2Q9UN36 371 aaKnown RBP15.47■□□□□ 0.07
HMGCS1-203ENST00000507004 NUP210Q8TEM1 1887 aaPredicted RBP15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 MYBPHLA2RUH7 354 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 NOL4O94818 638 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 STAU1O95793 577 aaKnown RBP15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 F11P03951 625 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 TNNI1P19237 187 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 CCNE1P24864 410 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 WNT7BP56706 349 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 NLRP12P59046 1061 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 PSMD2Q13200 908 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 FZD5Q13467 585 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 PSMD6Q15008 389 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 LIMS2Q7Z4I7 341 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 MON1AQ86VX9 555 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 CBWD2Q8IUF1 395 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 ZNF687Q8N1G0 1237 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 SPEM1Q8N4L4 309 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 GIPC2Q8TF65 315 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 PI4K2AQ9BTU6 479 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 RCOR1Q9UKL0 485 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 PCDHA7Q9UN72 937 aa15.46■□□□□ 0.07
HMGCS1-203ENST00000507004 SHISA7A6NL88 538 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 SPECC1L-ADORA2AF8WAN1 911 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 NRG2O14511 850 aaPredicted RBP15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 LILRB5O75023 590 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 KIF20AO95235 890 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 PAPSS2O95340 614 aaPredicted RBP15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 CHRNB1P11230 501 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 HMGA1P17096 107 aaKnown RBP15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 WARSP23381 471 aaKnown RBP15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 ATICP31939 592 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 CTHP32929 405 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 CXCL12P48061 93 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 CYP4F8P98187 520 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 MTAPQ13126 283 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 KNOP1Q1ED39 458 aaKnown RBP15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 SOWAHAQ2M3V2 549 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 ITPRIPL2Q3MIP1 535 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 STXBP5Q5T5C0 1151 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 CC2D1AQ6P1N0 951 aaPredicted RBP15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 FAM171BQ6P995 826 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 TRAPPC11Q7Z392 1133 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 ZSWIM2Q8NEG5 633 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 TMEM174Q8WUU8 243 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 SCFD1Q8WVM8 642 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 PKMYT1Q99640 499 aa15.45■□□□□ 0.06
HMGCS1-203ENST00000507004 CGRRF1Q99675 332 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms