RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 SP9P0CG40 484 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 LAMP2P13473 410 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 BMP6P22004 513 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 CDR1P51861 262 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 CLDN10P78369 228 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 NTHL1P78549 312 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
TCOF1-209ENST00000506630 TSPY1Q01534 308 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 GPR17Q13304 367 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 NCOA4Q13772 614 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 ZNF699Q32M78 642 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 POTEHQ6S545 545 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 RTL10Q7L3V2 364 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 GET4Q7L5D6 327 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-209ENST00000506630 OSTM1Q86WC4 334 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 NELFBQ8WX92 580 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-209ENST00000506630 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-209ENST00000506630 SHDQ96IW2 340 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 MKNK1Q9BUB5 465 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 CLSTN2Q9H4D0 955 aa14.05□□□□□ -0.16
TCOF1-209ENST00000506630 DDX43Q9NXZ2 648 aaKnown RBP14.05□□□□□ -0.16
TCOF1-209ENST00000506630 COL4A3Q01955 1670 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 SLC16A3O15427 465 aaKnown RBP14.04□□□□□ -0.16
TCOF1-209ENST00000506630 VNN2O95498 520 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
TCOF1-209ENST00000506630 ATICP31939 592 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 PIK3CAP42336 1068 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 GCLMP48507 274 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 TWF1Q12792 350 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 DUSP4Q13115 394 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 SOWAHAQ2M3V2 549 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 WDR72Q3MJ13 1102 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 ZACNQ401N2 412 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 DCAF17Q5H9S7 520 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-209ENST00000506630 C1orf220Q5T0J3 134 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 SV2AQ7L0J3 742 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 DCP1BQ8IZD4 617 aaKnown RBP14.04□□□□□ -0.16
TCOF1-209ENST00000506630 ELMOD1Q8N336 334 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 TRIML1Q8N9V2 468 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 SPATA18Q8TC71 538 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 NUP62CLQ9H1M0 184 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 SLC2A4RGQ9NR83 387 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 HCFC1R1Q9NWW0 138 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 DLL3Q9NYJ7 618 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 NXF1Q9UBU9 619 aaKnown RBP14.04□□□□□ -0.16
TCOF1-209ENST00000506630 MAFFQ9ULX9 164 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 YIPF1Q9Y548 306 aa14.04□□□□□ -0.16
TCOF1-209ENST00000506630 BICDL2A1A5D9 508 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 IKBKBO14920 756 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 HCRTO43612 131 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 VNN1O95497 513 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 STAU1O95793 577 aaKnown RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 POU2F2P09086 479 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 FSHRP23945 695 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 LHX1P48742 406 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 STX17P56962 302 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 PAK1Q13153 545 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 PABPC1LQ4VXU2 614 aaKnown RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 ZNF667Q5HYK9 610 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 INTS6LQ5JSJ4 861 aaKnown RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 TCERG1LQ5VWI1 586 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 SCARA5Q6ZMJ2 495 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 DPH6Q7L8W6 267 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 ZC3H3Q8IXZ2 948 aaKnown RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 TTC9BQ8N6N2 239 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 ATAD1Q8NBU5 361 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 PJA1Q8NG27 643 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 ELMO3Q96BJ8 720 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 SEPT5Q99719 369 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 ACBD6Q9BR61 282 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 XYLT2Q9H1B5 865 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 CRISPLD1Q9H336 500 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 ABI2Q9NYB9 513 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 DNMT3BQ9UBC3 853 aaKnown RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 SLC27A5Q9Y2P5 690 aa14.03□□□□□ -0.16
TCOF1-209ENST00000506630 NUP210Q8TEM1 1887 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-209ENST00000506630 ZNF292O60281 2723 aa14.02□□□□□ -0.16
TCOF1-209ENST00000506630 ANAPC1Q9H1A4 1944 aa14.02□□□□□ -0.16
TCOF1-209ENST00000506630 MYO16Q9Y6X6 1858 aa14.02□□□□□ -0.16
TCOF1-209ENST00000506630 ANHXE9PGG2 379 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 NRG2O14511 850 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 SOAT2O75908 522 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 HLA-DRAP01903 254 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 SDHBP21912 280 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 WARSP23381 471 aaKnown RBP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 PCSK1P29120 753 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 MXI1P50539 228 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 ENPEPQ07075 957 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 PPP3CAQ08209 521 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 SMARCB1Q12824 385 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 PLD1Q13393 1074 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 HTR4Q13639 388 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 MGAT5BQ3V5L5 792 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 IQCEQ6IPM2 695 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms