RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CAPN14A8MX76 684 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 FAM155BO75949 473 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 FDX1P10109 184 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 AMPD1P23109 780 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 PIK3CAP42336 1068 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 CYP4A11Q02928 519 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 PPP3CAQ08209 521 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 DBN1Q16643 649 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 CFAP157Q5JU67 520 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 ALLCQ8N6M5 410 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 FAM172AQ8WUF8 416 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 SIKE1Q9BRV8 207 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 MRPL47Q9HD33 250 aaKnown RBP16.68■□□□□ 0.26
SCLT1-208ENST00000506368 COQ4Q9Y3A0 265 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 GREB1LQ9C091 1923 aaPredicted RBP16.68■□□□□ 0.26
SCLT1-208ENST00000506368 SFI1A8K8P3 1242 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 BUD23O43709 281 aaKnown RBP16.68■□□□□ 0.26
SCLT1-208ENST00000506368 LIASO43766 372 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 PEX1O43933 1283 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 ENPEPQ07075 957 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 CIAPIN1Q6FI81 312 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 RASSF3Q86WH2 238 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 CPNE8Q86YQ8 564 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 ULK2Q8IYT8 1036 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 ZBED8Q8IZ13 594 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 MCOLN2Q8IZK6 566 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 RAB3IL1Q8TBN0 382 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 MZB1Q8WU39 189 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 DDX1Q92499 740 aaKnown RBP16.68■□□□□ 0.26
SCLT1-208ENST00000506368 DHX38Q92620 1227 aaKnown RBP16.68■□□□□ 0.26
SCLT1-208ENST00000506368 APBB2Q92870 758 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 MTBPQ96DY7 904 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 C7orf26Q96N11 449 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 DDX50Q9BQ39 737 aaKnown RBP16.68■□□□□ 0.26
SCLT1-208ENST00000506368 RABGEF1Q9UJ41 708 aa16.68■□□□□ 0.26
SCLT1-208ENST00000506368 OPHN1O60890 802 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 PFDN1O60925 122 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 UNGP13051 313 aaPredicted RBP16.67■□□□□ 0.26
SCLT1-208ENST00000506368 GPC3P51654 580 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 RNASEH2BQ5TBB1 312 aaKnown RBP16.67■□□□□ 0.26
SCLT1-208ENST00000506368 C1orf146Q5VVC0 180 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 CC2D2BQ6DHV5 1058 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 NSMFQ6X4W1 530 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 B3GNT6Q6ZMB0 384 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 DHDDSQ86SQ9 333 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 RCOR2Q8IZ40 523 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 APOPT1Q96IL0 206 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 VCPIP1Q96JH7 1222 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 KREMEN1Q96MU8 473 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 ACCSQ96QU6 501 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 PANX3Q96QZ0 392 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 AMNQ9BXJ7 453 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 PCDH9Q9HC56 1237 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 ARHGEF4Q9NR80 690 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 JAG2Q9Y219 1238 aa16.67■□□□□ 0.26
SCLT1-208ENST00000506368 FAM86B1E9PN63 330 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 LPXNO60711 386 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 RNASEH1O60930 286 aaKnown RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 SLITRK3O94933 977 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 FAM86B2P0C5J1 330 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 MYL2P10916 166 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 AKR1B1P15121 316 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 PTPN7P35236 360 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ARMC3Q5W041 872 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 USP37Q86T82 979 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 PASD1Q8IV76 773 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 PPM1KQ8N3J5 372 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 NT5C1BQ96P26 610 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 HERPUD2Q9BSE4 406 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 FRMD8P1Q9BZ68 369 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 KLHL4Q9C0H6 718 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 S100A14Q9HCY8 104 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 THEGQ9P2T0 379 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ZNF510Q9Y2H8 683 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 H3BRJ5 948 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ZC3H11AO75152 810 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ETV4P43268 484 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 GCLMP48507 274 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ARSEP51690 589 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ARL4CP56559 192 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 BPIFB4P59827 614 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 SLC18A2Q05940 514 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 OVGP1Q12889 678 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 PDIA2Q13087 525 aaKnown RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 CYLC2Q14093 348 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 HIF1AQ16665 826 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ATG16L1Q676U5 607 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 KRT39Q6A163 491 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 PAFAH2Q99487 392 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms