RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CDH7Q9ULB5 785 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 SLC27A5Q9Y2P5 690 aa17.83■□□□□ 0.44
SNCA-209ENST00000506244 A8MXQ7 604 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 MICAL2O94851 1124 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 CCDC192P0DO97 292 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 HAPLN1P10915 354 aaPredicted RBP17.82■□□□□ 0.44
SNCA-209ENST00000506244 STX17P56962 302 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 RPL10AP62906 217 aaKnown RBP17.82■□□□□ 0.44
SNCA-209ENST00000506244 NTHL1P78549 312 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 MTMR3Q13615 1198 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 TAF12Q16514 161 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 PTPN21Q16825 1174 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 WDR44Q5JSH3 913 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 TTC9BQ8N6N2 239 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 PSMG2Q969U7 264 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 NXPE3Q969Y0 559 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 SLC35C1Q96A29 364 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 FAXDC2Q96IV6 333 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 TNIP3Q96KP6 325 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 MYADMQ96S97 322 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 CEP72Q9P209 647 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 IGSF9Q9P2J2 1179 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 GTF3C4Q9UKN8 822 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 SORCS3Q9UPU3 1222 aa17.82■□□□□ 0.44
SNCA-209ENST00000506244 ATP8B3O60423 1300 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 PI4K2BG5E9Z4 385 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 LAMP2P13473 410 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 EPHA5P54756 1037 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 PSMC1P62191 440 aaKnown RBP17.81■□□□□ 0.44
SNCA-209ENST00000506244 CETN1Q12798 172 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 FAM171BQ6P995 826 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 TTC39CQ8N584 583 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 B3GALNT2Q8NCR0 500 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 MYCBPAPQ8TBZ2 947 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 GPT2Q8TD30 523 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 FGF13Q92913 245 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 MYLPFQ96A32 169 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 GCNAQ96QF7 691 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 PI4K2AQ9BTU6 479 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 C1QTNF1Q9BXJ1 281 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 FAM124BQ9H5Z6 455 aaPredicted RBP17.81■□□□□ 0.44
SNCA-209ENST00000506244 CYP3A43Q9HB55 503 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 TMLHEQ9NVH6 421 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 RAB20Q9NX57 234 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 GDE1Q9NZC3 331 aa17.81■□□□□ 0.44
SNCA-209ENST00000506244 MYBPHLA2RUH7 354 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 PDGFRBP09619 1106 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 ATF6P18850 670 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 LMO2P25791 158 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 MAGEA11P43364 429 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 ASPAP45381 313 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 MARSP56192 900 aaKnown RBP17.8■□□□□ 0.44
SNCA-209ENST00000506244 NLRP12P59046 1061 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 TPD52L1Q16890 204 aaPredicted RBP17.8■□□□□ 0.44
SNCA-209ENST00000506244 MDH1BQ5I0G3 518 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 CT47A1Q5JQC4 288 aaPredicted RBP17.8■□□□□ 0.44
SNCA-209ENST00000506244 VSTM1Q6UX27 236 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 MTSS1LQ765P7 747 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 UNC93AQ86WB7 457 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 NPAS3Q8IXF0 933 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 UBALD2Q8IYN6 164 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 ITFG1Q8TB96 612 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 CEP295NLQ96MC4 621 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 SRRTQ9BXP5 876 aaKnown RBP17.8■□□□□ 0.44
SNCA-209ENST00000506244 BCO2Q9BYV7 579 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 DNAJC25Q9H1X3 360 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 MAGEC2Q9UBF1 373 aaPredicted RBP17.8■□□□□ 0.44
SNCA-209ENST00000506244 LIMD1Q9UGP4 676 aa17.8■□□□□ 0.44
SNCA-209ENST00000506244 DOCK8Q8NF50 2099 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 PMM2O15305 246 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 P4HA2O15460 535 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 HCRTO43612 131 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 SOAT2O75908 522 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 CSH1P0DML2 217 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 CSH2P0DML3 217 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 MYL4P12829 197 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 PTPN1P18031 435 aaKnown RBP17.79■□□□□ 0.44
SNCA-209ENST00000506244 RAP1GAPP47736 663 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 CYP27A1Q02318 531 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 SLC5A9Q2M3M2 681 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 DPCR1Q3MIW9 517 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 CBWD6Q4V339 395 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 CBWD3Q5JTY5 395 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 PRSS36Q5K4E3 855 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 CBWD5Q5RIA9 395 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 SPOPLQ6IQ16 392 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 ING5Q8WYH8 240 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 ELOVL4Q9GZR5 314 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 CRTAC1Q9NQ79 661 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
SNCA-209ENST00000506244 TRIM66O15016 1216 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 ATP2C2O75185 946 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 CEBPBP17676 345 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 ANXA13P27216 316 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 ERCC5P28715 1186 aaPredicted RBP17.78■□□□□ 0.44
SNCA-209ENST00000506244 CDC25CP30307 473 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 FMO5P49326 533 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 CDH8P55286 799 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 INCA1Q0VD86 236 aa17.78■□□□□ 0.44
SNCA-209ENST00000506244 CCDC183Q5T5S1 534 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms