RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SNX29Q8TEQ0 813 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CTNNBL1Q8WYA6 563 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 UTP4Q969X6 686 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 JAKMIP1Q96N16 626 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ERP44Q9BS26 406 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TWSG1Q9GZX9 223 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 LHX5Q9H2C1 402 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 LDAHQ9H6V9 325 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 FAM204AQ9H8W3 233 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 KCNQ5Q9NR82 932 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 HMGXB4Q9UGU5 601 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 USP21Q9UK80 565 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 COL11A1P12107 1806 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CASP8AP2Q9UKL3 1982 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 KRBA1A5PL33 1030 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TRIM43BA6NCK2 446 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GOLGA6L4A6NEF3 574 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 WTIPA6NIX2 430 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GOLGA8BA8MQT2 603 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CEP104O60308 925 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CUTAO60888 179 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CRTAMO95727 393 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CD3EP07766 207 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 HSPA1AP0DMV8 641 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 HSPA1BP0DMV9 641 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 POU3F3P20264 500 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PTX3P26022 381 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 HAAOP46952 286 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 YARSP54577 528 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CT83Q5H943 113 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ARMC4Q5T2S8 1044 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 BROXQ5VW32 411 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 FAM173BQ6P4H8 233 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CCDC62Q6P9F0 684 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ZPBP2Q6X784 338 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ARMC9Q7Z3E5 817 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TMEM192Q8IY95 271 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SLFN12Q8IYM2 578 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ZGPATQ8N5A5 531 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CCDC155Q8N6L0 562 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TTC8Q8TAM2 541 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ATXN2LQ8WWM7 1075 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CCDC34Q96HJ3 373 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 VPS50Q96JG6 964 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SDF4Q9BRK5 362 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ZNF700Q9H0M5 742 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TNMDQ9H2S6 317 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ABCB6Q9NP58 842 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ZDHHC7Q9NXF8 308 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 LUZP4Q9P127 313 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SAMD15Q9P1V8 674 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 RBPJLQ9UBG7 517 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SALL4Q9UJQ4 1053 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TAF6LQ9Y6J9 622 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 IKBKGQ9Y6K9 419 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 A0A1W2PQU0 124 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 IFRD1O00458 451 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PLOD2O00469 737 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SCDO00767 359 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 VNN1O95497 513 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 FAM107AO95990 144 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 FPR2P25090 351 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 AKT1P31749 480 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 HSPA4P34932 840 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 POLR2GP62487 172 aaKnown RBP eCLIP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GABREP78334 506 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 MECOMQ03112 1051 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 NFIXQ14938 502 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TXNRD1Q16881 649 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 KRT71Q3SY84 523 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TTMPQ5BVD1 217 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 NOL9Q5SY16 702 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 KAZNQ674X7 775 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 STYK1Q6J9G0 422 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SLCO4C1Q6ZQN7 724 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 FASTKD5Q7L8L6 764 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DGLUCYQ7Z3D6 616 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DPP9Q86TI2 863 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ATP6V0D2Q8N8Y2 350 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GALNT11Q8NCW6 608 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TNIP3Q96KP6 325 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CNTNAP3BQ96NU0 1288 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DHRS9Q9BPW9 319 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CNTNAP3Q9BZ76 1288 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DPH5Q9H2P9 285 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CERS4Q9HA82 394 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 KMT5AQ9NQR1 393 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 THAP1Q9NVV9 213 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GFOD1Q9NXC2 390 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SCAF8Q9UPN6 1271 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 C2orf81A6NN90 581 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 AKR1B15C9JRZ8 316 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GRM8O00222 908 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 S100A6P06703 90 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ITIH2P19823 946 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CHRM3P20309 590 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 RCAN1P53805 252 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SNX16P57768 344 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DSTNP60981 165 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ATP6V0D1P61421 351 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms