RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SV2CQ496J9 727 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 ZC2HC1CQ53FD0 456 aaPredicted RBP8.9□□□□□ -0.98
SNF8-204ENST00000506104 RILPL1Q5EBL4 403 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 NAIF1Q69YI7 327 aaPredicted RBP8.9□□□□□ -0.98
SNF8-204ENST00000506104 DYMQ7RTS9 669 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 CD302Q8IX05 232 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 CPA6Q8N4T0 437 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 SPPL2BQ8TCT7 592 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 POMGNT1Q8WZA1 660 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 EXOC4Q96A65 974 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 CHFRQ96EP1 664 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 P2RY13Q9BPV8 354 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 NTPCRQ9BSD7 190 aaKnown RBP8.9□□□□□ -0.98
SNF8-204ENST00000506104 EDEM2Q9BV94 578 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 TPSD1Q9BZJ3 242 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 PARVGQ9HBI0 331 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 TDP1Q9NUW8 608 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 DUS2Q9NX74 493 aaKnown RBP8.9□□□□□ -0.98
SNF8-204ENST00000506104 TBC1D7Q9P0N9 293 aa8.9□□□□□ -0.98
SNF8-204ENST00000506104 AGO2Q9UKV8 859 aaKnown RBP8.9□□□□□ -0.98
SNF8-204ENST00000506104 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.98
SNF8-204ENST00000506104 ABCA7Q8IZY2 2146 aa8.9□□□□□ -0.99
SNF8-204ENST00000506104 CNOT1A5YKK6 2376 aaKnown RBP8.9□□□□□ -0.99
SNF8-204ENST00000506104 MYOFQ9NZM1 2061 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 C4orf47A7E2U8 309 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 RHOBTB1O94844 696 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 KCNK5O95279 499 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 PAPSS2O95340 614 aaPredicted RBP8.89□□□□□ -0.99
SNF8-204ENST00000506104 ABL1P00519 1130 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 DHPSP49366 369 aaPredicted RBP8.89□□□□□ -0.99
SNF8-204ENST00000506104 AARSP49588 968 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNF8-204ENST00000506104 NLRP12P59046 1061 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 ATP2C1P98194 919 aaPredicted RBP8.89□□□□□ -0.99
SNF8-204ENST00000506104 DMC1Q14565 340 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 DDR2Q16832 855 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 C2orf27AQ580R0 203 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 ARSHQ5FYA8 562 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 LRRTM3Q86VH5 581 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 CCDC33Q8N5R6 958 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
SNF8-204ENST00000506104 USP13Q92995 863 aaPredicted RBP8.89□□□□□ -0.99
SNF8-204ENST00000506104 CD101Q93033 1021 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 SAAL1Q96ER3 474 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 ZNF560Q96MR9 790 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 CYP2S1Q96SQ9 504 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 IL21Q9HBE4 155 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 HPS4Q9NQG7 708 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 VPS45Q9NRW7 570 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 TMLHEQ9NVH6 421 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 KCND2Q9NZV8 630 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 CPSF3Q9UKF6 684 aaKnown RBP8.89□□□□□ -0.99
SNF8-204ENST00000506104 ODF2LQ9ULJ1 636 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 AGAP1Q9UPQ3 857 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 WNT6Q9Y6F9 365 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 MYH10P35580 1976 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 HELZP42694 1942 aaKnown RBP8.89□□□□□ -0.99
SNF8-204ENST00000506104 ANAPC1Q9H1A4 1944 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 ADAMTS9Q9P2N4 1935 aa8.89□□□□□ -0.99
SNF8-204ENST00000506104 CEP192Q8TEP8 1941 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 FRYLO94915 3013 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 TRAV19A0A0A6YYK7 116 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 A0A0B4J269 797 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 GOLGA8IPA6NC78 632 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 OTOL1A6NHN0 477 aaPredicted RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 GOLGA8JA6NMD2 632 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 KPNA7A9QM74 516 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 PIRO00625 290 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 SCAMP3O14828 347 aaKnown RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 GIPC1O14908 333 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 MAP3K13O43283 966 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 HUS1O60921 280 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 APBB3O95704 486 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 CAVIN2O95810 425 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 CSH1P0DML2 217 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 CSH2P0DML3 217 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 PLCG1P19174 1290 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 SPINK2P20155 84 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 DRD1P21728 446 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 CYP2F1P24903 491 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 GJB2P29033 226 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 POLR2BP30876 1174 aaKnown RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 RPL10AP62906 217 aaKnown RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 MYL7Q01449 175 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 ZNF252P-AS1Q0IIN9 211 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 IFRD2Q12894 506 aaPredicted RBP8.88□□□□□ -0.99
SNF8-204ENST00000506104 NR1H3Q13133 447 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 KCNB1Q14721 858 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 MTF1Q14872 753 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 PDGFRLQ15198 375 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 PLK5Q496M5 336 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 TMEM119Q4V9L6 283 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 TMEM196Q5HYL7 178 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 DAB2IPQ5VWQ8 1189 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 SLFN12LQ6IEE8 588 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 KIAA1211LQ6NV74 962 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 SLC39A4Q6P5W5 647 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 CYP2U1Q7Z449 544 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 SFR1Q86XK3 245 aa8.88□□□□□ -0.99
SNF8-204ENST00000506104 SPATA2LQ8IUW3 424 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms