RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 CDR2Q01850 454 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 DSG1Q02413 1049 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 MLLT1Q03111 559 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 ARID5AQ03989 594 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 KRT17Q04695 432 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 YWHAHQ04917 246 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 UBE3AQ05086 875 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 BMS1Q14692 1282 aaKnown RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 CNGA2Q16280 664 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 ZNF394Q53GI3 561 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 VARS2Q5ST30 1063 aaKnown RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 KIAA0319Q5VV43 1072 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 ARHGAP17Q68EM7 881 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 ANKS3Q6ZW76 656 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 TAS1R1Q7RTX1 841 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 ZNF571Q7Z3V5 609 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 ACOT1Q86TX2 421 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 NOP9Q86U38 636 aaKnown RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 B3GALNT2Q8NCR0 500 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 LNX1Q8TBB1 728 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 PIK3R5Q8WYR1 880 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 TFAP2BQ92481 460 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 AGPAT1Q99943 283 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 ZSWIM1Q9BR11 485 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 KCNF1Q9H3M0 494 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 NHEJ1Q9H9Q4 299 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 NENFQ9UMX5 172 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 TIMM13Q9Y5L4 95 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 BACE2Q9Y5Z0 518 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 CHD9Q3L8U1 2897 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 DOCK8Q8NF50 2099 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 TRIOBPQ9H2D6 2365 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 OR6C75A6NL08 312 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 EIF3CLB5ME19 914 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 O00370 1275 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ARHGAP6O43182 974 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 THAP12O43422 761 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 MED7O43513 233 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 HCRTO43612 131 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 NRDCO43847 1150 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ATP8B3O60423 1300 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ARHGEF15O94989 841 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 CYP1A1P04798 512 aaPredicted RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 CA3P07451 260 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 CTSAP10619 480 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 GZMAP12544 262 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 MYOGP15173 224 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 CDH5P33151 784 aaPredicted RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 EIF4A3P38919 411 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 SMAD3P84022 425 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 TAP1Q03518 808 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 SMARCB1Q12824 385 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 MAPRE1Q15691 268 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 RAB30Q15771 203 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 SLC18A3Q16572 532 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 PKDCCQ504Y2 493 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 SGO2Q562F6 1265 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 TDRD12Q587J7 1177 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 INTS6LQ5JSJ4 861 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 PRRC2BQ5JSZ5 2229 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 RTP2Q5QGT7 225 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 PPP1R26Q5T8A7 1209 aaPredicted RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 SLC8B1Q6J4K2 584 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ZNF280DQ6N043 979 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 LCLAT1Q6UWP7 414 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 PAQR9Q6ZVX9 377 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 DENND4AQ7Z401 1863 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 C12orf29Q8N999 325 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 KLHL23Q8NBE8 558 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 MYCBPAPQ8TBZ2 947 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 SPPL3Q8TCT6 385 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 SLC20A1Q8WUM9 679 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 HEXIM2Q96MH2 286 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 TGS1Q96RS0 853 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 EIF3CQ99613 913 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 HNRNPABQ99729 332 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 SYT15Q9BQS2 421 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 PBX4Q9BYU1 374 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ZNF518BQ9C0D4 1074 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ZCWPW1Q9H0M4 648 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ZBP1Q9H171 429 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 LHX5Q9H2C1 402 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 DPEP3Q9H4B8 488 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 ACP6Q9NPH0 428 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 CRTAC1Q9NQ79 661 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 FNIP2Q9P278 1114 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 MTRRQ9UBK8 725 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 MSRAQ9UJ68 235 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.65□□□□□ -1.18
NUP54-204ENST00000506098 SSX2IPQ9Y2D8 614 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 YBX2Q9Y2T7 364 aaKnown RBP7.65□□□□□ -1.18
NUP54-204ENST00000506098 IRAK3Q9Y616 596 aa7.65□□□□□ -1.18
NUP54-204ENST00000506098 NUP205Q92621 2012 aa7.64□□□□□ -1.19
NUP54-204ENST00000506098 A0A087X0T9 212 aa7.64□□□□□ -1.19
NUP54-204ENST00000506098 MYBPHLA2RUH7 354 aa7.64□□□□□ -1.19
NUP54-204ENST00000506098 SOWAHDA6NJG2 315 aa7.64□□□□□ -1.19
NUP54-204ENST00000506098 H3BNC9 293 aa7.64□□□□□ -1.19
NUP54-204ENST00000506098 DDX3XO00571 662 aaKnown RBP eCLIP7.64□□□□□ -1.196e-11■□□□□ 8.2
NUP54-204ENST00000506098 FSCN2O14926 492 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms