RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PLEKHM1Q9Y4G2 1056 aa7.02□□□□□ -1.29
NIPBL-205ENST00000505998 HS3ST4Q9Y661 456 aa7.02□□□□□ -1.29
NIPBL-205ENST00000505998 HECW2Q9P2P5 1572 aa7.02□□□□□ -1.29
NIPBL-205ENST00000505998 AKNAQ7Z591 1439 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 ARHGEF40Q8TER5 1519 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 KDM6BO15054 1643 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 GCC2Q8IWJ2 1684 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 ADGRL2O95490 1459 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 ZNF518AQ6AHZ1 1483 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 MAGI2Q86UL8 1455 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 MLH3Q9UHC1 1453 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 PRAMEF33A0A0G2JMD5 474 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 A0A1W2PS29 197 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 MYADML2A6NDP7 307 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 PRC1O43663 620 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 MGEA5O60502 916 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 PRAMEF10O60809 474 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 DNAJB5O75953 348 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 SUN1O94901 812 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 THP07101 528 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 GRPP07492 148 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 GNALP38405 381 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 ANXA11P50995 505 aaKnown RBP7.01□□□□□ -1.29
NIPBL-205ENST00000505998 FPGSQ05932 587 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 ABHD18Q0P651 414 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 TP53BP2Q13625 1128 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 POLD3Q15054 466 aaPredicted RBP7.01□□□□□ -1.29
NIPBL-205ENST00000505998 GEN1Q17RS7 908 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 AMOTQ4VCS5 1084 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 FAM160B1Q5W0V3 765 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 ZNF783Q6ZMS7 281 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 OR6B3Q8NGW1 331 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 TMEM125Q96AQ2 219 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 TRIM54Q9BYV2 358 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 MRPS18AQ9NVS2 196 aaKnown RBP7.01□□□□□ -1.29
NIPBL-205ENST00000505998 HS3ST3A1Q9Y663 406 aa7.01□□□□□ -1.29
NIPBL-205ENST00000505998 ADGRL1O94910 1474 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 CCNB3Q8WWL7 1395 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 FRS3O43559 492 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 FZD7O75084 574 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 CAND2O75155 1236 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 ZFPL1O95159 310 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 PIM1P11309 404 aaPredicted RBP7□□□□□ -1.29
NIPBL-205ENST00000505998 PEX2P28328 305 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 VAV2P52735 878 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 RPS7P62081 194 aaKnown RBP7□□□□□ -1.29
NIPBL-205ENST00000505998 ZXDAP98168 799 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 TCF15Q12870 199 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 PPP1R32Q7Z5V6 425 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 PSD4Q8NDX1 1056 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 ANKS1AQ92625 1134 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 SUCLG2Q96I99 432 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 LRIG1Q96JA1 1093 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 LRRC27Q9C0I9 530 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 SRRDQ9UH36 339 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 USP19O94966 1318 aa7□□□□□ -1.29
NIPBL-205ENST00000505998 CCDC141Q6ZP82 1450 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 ABCA6Q8N139 1617 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 EIF2AK4Q9P2K8 1649 aaKnown RBP6.99□□□□□ -1.29
NIPBL-205ENST00000505998 TRGV11A0A075B6L2 103 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 E7ENX8 843 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 MYO1CO00159 1063 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 EN2P19622 333 aaPredicted RBP6.99□□□□□ -1.29
NIPBL-205ENST00000505998 CHRM3P20309 590 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 FDXRP22570 491 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 ARFIP2P53365 341 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 MC2RQ01718 297 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 TAP2Q03519 686 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 DYRK1AQ13627 763 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 CD300EQ496F6 205 aaPredicted RBP6.99□□□□□ -1.29
NIPBL-205ENST00000505998 TAF2Q6P1X5 1199 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 USP51Q70EK9 711 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 Q8N1X5 172 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 POC1BQ8TC44 478 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 SNX19Q92543 992 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 WDR11Q9BZH6 1224 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 SERHL2Q9H4I8 314 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 UNKLQ9H9P5 680 aaKnown RBP6.99□□□□□ -1.29
NIPBL-205ENST00000505998 DDX21Q9NR30 783 aaKnown RBP eCLIP6.99□□□□□ -1.29
NIPBL-205ENST00000505998 TBCCD1Q9NVR7 557 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 TESQ9UGI8 421 aaKnown RBP6.99□□□□□ -1.29
NIPBL-205ENST00000505998 PCDHGB6Q9Y5F9 930 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 RAD54BQ9Y620 910 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 RTEL1-TNFRSF6BF6WH68 1400 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 DIP2CQ9Y2E4 1556 aa6.99□□□□□ -1.29
NIPBL-205ENST00000505998 DEPDC5O75140 1603 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 ATP7AQ04656 1500 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 ISM1B1AKI9 464 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 MYO1FO00160 1098 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 BTN3A1O00481 513 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 TBC1D4O60343 1298 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 KRT18P05783 430 aaKnown RBP6.98□□□□□ -1.29
NIPBL-205ENST00000505998 ITGAMP11215 1152 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 BRAFP15056 766 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 SUMO3P55854 103 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-205ENST00000505998 TBX4P57082 545 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 SEMA5AQ13591 1074 aa6.98□□□□□ -1.29
NIPBL-205ENST00000505998 COBLL1Q53SF7 1204 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms