RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PEX2P28328 305 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 CACNB3P54284 484 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 INHBCP55103 352 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 FAM193AP78312 1265 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 SLC13A2Q13183 592 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 TUBB3Q13509 450 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 SEMA5AQ13591 1074 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 DARS2Q6PI48 645 aaKnown RBP4.85□□□□□ -1.63
CHD1-203ENST00000505657 ZNF280BQ86YH2 543 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 FAM109AQ8N4B1 249 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 SLC15A4Q8N697 577 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 OR6B3Q8NGW1 331 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 CAVIN3Q969G5 261 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 COQ10AQ96MF6 247 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 AGAP2Q99490 1192 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 SERHLQ9NQF3 203 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 DDX21Q9NR30 783 aaKnown RBP eCLIP4.85□□□□□ -1.63
CHD1-203ENST00000505657 FAM50BQ9Y247 325 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 TBC1D30Q9Y2I9 924 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 TMX2Q9Y320 296 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 DMRT1Q9Y5R6 373 aa4.85□□□□□ -1.63
CHD1-203ENST00000505657 SPATA31A3Q5VYP0 1347 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 GOLIM4O00461 696 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 MGST3O14880 152 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 PROM1O43490 865 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 ESRRBO95718 433 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 GCP02774 474 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 PDHA1P08559 390 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 CD6P30203 668 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 GNALP38405 381 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 VIPR2P41587 438 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 PURAQ00577 322 aaKnown RBP4.84□□□□□ -1.63
CHD1-203ENST00000505657 FMO1Q01740 532 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 SP2Q02086 613 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 MPP3Q13368 585 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 POLD3Q15054 466 aaPredicted RBP4.84□□□□□ -1.63
CHD1-203ENST00000505657 ZIK1Q3SY52 487 aaPredicted RBP4.84□□□□□ -1.63
CHD1-203ENST00000505657 C3orf38Q5JPI3 329 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 DCAF12L1Q5VU92 463 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 PPP4R4Q6NUP7 873 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 SESTD1Q86VW0 696 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 MICU3Q86XE3 530 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD1-203ENST00000505657 SUPT20HQ8NEM7 779 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 TOR1AIP2Q8NFQ8 470 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 OR56A3Q8NH54 315 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 AMBRA1Q9C0C7 1298 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 ALG13Q9NP73 1137 aaKnown RBP4.84□□□□□ -1.63
CHD1-203ENST00000505657 SACM1LQ9NTJ5 587 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 TPCN1Q9ULQ1 816 aa4.84□□□□□ -1.63
CHD1-203ENST00000505657 A0A087X1B8 175 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 hCG_1984214I3L0E3 225 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 YY2O15391 372 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 ERBB2P04626 1255 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 THP07101 528 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 CHRM2P08172 466 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 AVPR1BP47901 424 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 LOXL3P58215 753 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 NANOS3P60323 173 aaKnown RBP4.83□□□□□ -1.64
CHD1-203ENST00000505657 BLOC1S1P78537 153 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 TAP1Q03518 808 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 IQCB1Q15051 598 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 CNGA2Q16280 664 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 TXNRD1Q16881 649 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 LMBRD2Q68DH5 695 aaPredicted RBP4.83□□□□□ -1.64
CHD1-203ENST00000505657 ZDHHC24Q6UX98 284 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 MPP5Q8N3R9 675 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 B3GALNT2Q8NCR0 500 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 RAPGEF4Q8WZA2 1011 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 TFAP2BQ92481 460 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 APIPQ96GX9 242 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 OSBPL9Q96SU4 736 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 MESP1Q9BRJ9 268 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 ACTRT3Q9BYD9 372 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 TOR3AQ9H497 397 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 WDR26Q9H7D7 661 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 COL20A1Q9P218 1284 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 PACSIN3Q9UKS6 424 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 MRPS17Q9Y2R5 130 aaKnown RBP4.83□□□□□ -1.64
CHD1-203ENST00000505657 TNFRSF18Q9Y5U5 241 aa4.83□□□□□ -1.64
CHD1-203ENST00000505657 POLR2AP24928 1970 aaKnown RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 ADGRA2Q96PE1 1338 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 TRIM43BA6NCK2 446 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 ADM5C9JUS6 153 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 APAF1O14727 1248 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 PPM1DO15297 605 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 TRIAP1O43715 76 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 PEX1O43933 1283 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 TBC1D4O60343 1298 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 SOAT2O75908 522 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 MAP4K4O95819 1239 aaPredicted RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 ATXN1LP0C7T5 689 aaKnown RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 ELFN1P0C7U0 828 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 SLC5A1P13866 664 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 RPS16P62249 146 aaKnown RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 EIF2B5Q13144 721 aaKnown RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 HNRNPA0Q13151 305 aaKnown RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 AMOTQ4VCS5 1084 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 HSP90AB2PQ58FF8 381 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 ARHGAP40Q5TG30 622 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms