RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 STK25O00506 426 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 STX10O60499 249 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 LRRN2O75325 713 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 GNA14O95837 355 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 ASS1P00966 412 aaKnown RBP18.05■□□□□ 0.48
SYNE4-207ENST00000505054 OR4Q2P0C623 313 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 MXI1P50539 228 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 STX1AQ16623 288 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 ZNF699Q32M78 642 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 WDR72Q3MJ13 1102 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 CT47A1Q5JQC4 288 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-207ENST00000505054 KRT39Q6A163 491 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 METTL23Q86XA0 190 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 TRIM59Q8IWR1 403 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 ADGRF2Q8IZF7 708 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 OXCT2Q9BYC2 517 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-207ENST00000505054 PIDD1Q9HB75 910 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 ANO10Q9NW15 660 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.05■□□□□ 0.48
SYNE4-207ENST00000505054 CA14Q9ULX7 337 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 POLIQ9UNA4 740 aa18.05■□□□□ 0.48
SYNE4-207ENST00000505054 ZNF292O60281 2723 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 HCRTO43612 131 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 ABLIM3O94929 683 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 VNN2O95498 520 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 FGFR1OPO95684 399 aaKnown RBP18.04■□□□□ 0.48
SYNE4-207ENST00000505054 SPOPLQ6IQ16 392 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 GET4Q7L5D6 327 aaPredicted RBP18.04■□□□□ 0.48
SYNE4-207ENST00000505054 DPH6Q7L8W6 267 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 TMEM86AQ8N2M4 240 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 ZNF461Q8TAF7 563 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 SPATA18Q8TC71 538 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 GPR152Q8TDT2 470 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 SEMA4DQ92854 862 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 CNOT6LQ96LI5 555 aaKnown RBP18.04■□□□□ 0.48
SYNE4-207ENST00000505054 MRPL45Q9BRJ2 306 aaKnown RBP18.04■□□□□ 0.48
SYNE4-207ENST00000505054 PI4K2AQ9BTU6 479 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 APOBEC3GQ9HC16 384 aaKnown RBP18.04■□□□□ 0.48
SYNE4-207ENST00000505054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.482e-7■■■■■ 86.5
SYNE4-207ENST00000505054 NXF1Q9UBU9 619 aaKnown RBP18.04■□□□□ 0.48
SYNE4-207ENST00000505054 DOCK6Q96HP0 2047 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 PATJQ8NI35 1801 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 CACNA1AO00555 2505 aa18.04■□□□□ 0.48
SYNE4-207ENST00000505054 GABRDO14764 452 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 LMNAP02545 664 aaKnown RBP18.03■□□□□ 0.48
SYNE4-207ENST00000505054 LAMP2P13473 410 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 CPB1P15086 417 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 WARSP23381 471 aaKnown RBP18.03■□□□□ 0.48
SYNE4-207ENST00000505054 TNNC1P63316 161 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 TYRO3Q06418 890 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 HTR4Q13639 388 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 SGSM1Q2NKQ1 1148 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 ZNF667Q5HYK9 610 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 PHLDB3Q6NSJ2 640 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 RNF19BQ6ZMZ0 732 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 FBXL13Q8NEE6 735 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 TAF4BQ92750 862 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 MMS19Q96T76 1030 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 PRKD2Q9BZL6 878 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 ZCWPW1Q9H0M4 648 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 THAP9Q9H5L6 903 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 SMYD3Q9H7B4 428 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 ARHGEF3Q9NR81 526 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 DDX43Q9NXZ2 648 aaKnown RBP18.03■□□□□ 0.48
SYNE4-207ENST00000505054 COQ4Q9Y3A0 265 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 NME7Q9Y5B8 376 aa18.03■□□□□ 0.48
SYNE4-207ENST00000505054 DMXL1Q9Y485 3027 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 ANHXE9PGG2 379 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 TACC1O75410 805 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 CLSTN1O94985 981 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 SEC24AO95486 1093 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 C8AP07357 584 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 CCDC192P0DO97 292 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 ATF2P15336 505 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 ACAT1P24752 427 aaKnown RBP18.02■□□□□ 0.48
SYNE4-207ENST00000505054 FMO5P49326 533 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 NOP14P78316 857 aaKnown RBP18.02■□□□□ 0.48
SYNE4-207ENST00000505054 GPR17Q13304 367 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 TPD52L1Q16890 204 aaPredicted RBP18.02■□□□□ 0.48
SYNE4-207ENST00000505054 CCDC142Q17RM4 750 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 TPGS2Q68CL5 300 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 SCARA5Q6ZMJ2 495 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 THEM5Q8N1Q8 247 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 SLC7A14Q8TBB6 771 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 SDCBP2Q9H190 292 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 DNAJC25Q9H1X3 360 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 SLC2A4RGQ9NR83 387 aa18.02■□□□□ 0.48
SYNE4-207ENST00000505054 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
SYNE4-207ENST00000505054 ZFP37Q9Y6Q3 630 aaPredicted RBP18.02■□□□□ 0.48
SYNE4-207ENST00000505054 EP300Q09472 2414 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-207ENST00000505054 ZMYND10O75800 440 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 ASPAP45381 313 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 RAP1GAPP47736 663 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 LHX1P48742 406 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 MYL7Q01449 175 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 ADCY1Q08828 1119 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 LIN9Q5TKA1 542 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 ZC3H14Q6PJT7 736 aaKnown RBP18.01■□□□□ 0.47
SYNE4-207ENST00000505054 LRRTM3Q86VH5 581 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 ENOX1Q8TC92 643 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms