RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 MAPKAPK5Q8IW41 473 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 RNF152Q8N8N0 203 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 BRI3BPQ8WY22 251 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 EXTL1Q92935 676 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 PPP1R9BQ96SB3 815 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 NEU1Q99519 415 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 ZNF703Q9H7S9 590 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 PARPBPQ9NWS1 579 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 HESX1Q9UBX0 185 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 MID2Q9UJV3 735 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 NOX1Q9Y5S8 564 aa5.93□□□□□ -1.46
TRAPPC13-205ENST00000504243 FAM20BO75063 409 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 CYP2C9P11712 490 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 ITGA8P53708 1063 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 FOXE3Q13461 319 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 SLC29A2Q14542 456 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 DHX8Q14562 1220 aaKnown RBP5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 PLA1AQ53H76 456 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 TAF2Q6P1X5 1199 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 GGNQ86UU5 652 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 IL17DQ8TAD2 202 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 SMCR8Q8TEV9 937 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 RNF31Q96EP0 1072 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 ZC3H10Q96K80 434 aaKnown RBP5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 MED15Q96RN5 788 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 COLEC11Q9BWP8 271 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 TEX101Q9BY14 249 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 WDR12Q9GZL7 423 aaKnown RBP5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 MYO1AQ9UBC5 1043 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 HSFX1Q9UBD0 423 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 SHOC2Q9UQ13 582 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 MAN2B2Q9Y2E5 1009 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 MAP3K2Q9Y2U5 619 aa5.92□□□□□ -1.46
TRAPPC13-205ENST00000504243 A0A1W2PPC4 97 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 ADAMTS3O15072 1205 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 PLSCR1O15162 318 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 MATN3O15232 486 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 NBNO60934 754 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 ATXN1LP0C7T5 689 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 TXNP10599 105 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 ITGALP20701 1170 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 FDXRP22570 491 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 EEF1GP26641 437 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 IL1R2P27930 398 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 VIPR2P41587 438 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 GCLCP48506 637 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 HSPA7P48741 367 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 PXNP49023 591 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 LILRA4P59901 499 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 HTRA4P83105 476 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 FPGSQ05932 587 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 PDCD2Q16342 344 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 SLC35G1Q2M3R5 365 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 MGAT5BQ3V5L5 792 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 CACHD1Q5VU97 1274 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 METRNLQ641Q3 311 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 PGBD2Q6P3X8 592 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 CCDC174Q6PII3 467 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 ZDHHC24Q6UX98 284 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 PPP1R32Q7Z5V6 425 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 CLNKQ7Z7G1 428 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 ZNF527Q8NB42 609 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 MUL1Q969V5 352 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 HEPHQ9BQS7 1158 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 SMOC2Q9H3U7 446 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 ETAA1Q9NY74 926 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 FPGT-TNNI3KV9GXZ4 949 aa5.91□□□□□ -1.46
TRAPPC13-205ENST00000504243 LOC102723971A0A1B0GUV8 181 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 CCDC78A2IDD5 438 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 F5H697 171 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 H7C4K7 107 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 TRIM24O15164 1050 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 RGS10O43665 173 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 INMTO95050 263 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 RASAL1O95294 804 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 HLA-DOAP06340 250 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 IL1R1P14778 569 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 KCNA2P16389 499 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 TPH1P17752 444 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 TNFRSF1AP19438 455 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 PRKAG1P54619 331 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 OCA2Q04671 838 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 BOP1Q14137 746 aaKnown RBP5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 INSCQ1MX18 579 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 MPEG1Q2M385 716 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 CD300EQ496F6 205 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 MIIPQ5JXC2 388 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 TMEM108Q6UXF1 575 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 ANKRD42Q8N9B4 389 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 FANCBQ8NB91 859 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 TMEM125Q96AQ2 219 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 ZNF503Q96F45 646 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 LTV1Q96GA3 475 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 TMEM41AQ96HV5 264 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 PLEKHG4BQ96PX9 1271 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 MAGEB5Q9BZ81 275 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 NEU2Q9Y3R4 380 aa5.9□□□□□ -1.46
TRAPPC13-205ENST00000504243 A0A087WV62 115 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms