RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 NUP85Q9BW27 656 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 MIS12Q9H081 205 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RAB17Q9H0T7 212 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 DBNDD1Q9H9R9 158 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 VTA1Q9NP79 307 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ANLNQ9NQW6 1124 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 DENND2AQ9ULE3 1009 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SNX24Q9Y343 169 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC88AQ3V6T2 1871 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ATP10DQ9P241 1426 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 AKAP11Q9UKA4 1901 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SALL3Q9BXA9 1300 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF233A6NK53 670 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZBBXA8MT70 800 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GOLGA8SH3BPF8 625 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CLOCKO15516 846 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CALUO43852 315 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZWINTO95229 277 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NDUFA10O95299 355 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 KRT16P08779 473 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PAEPP09466 180 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 PABPC4LP0CB38 370 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TPBGLP0DKB5 382 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 DPEP1P16444 411 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 HSPA6P17066 643 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NR2F2P24468 414 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CRKP46108 304 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NR1D2Q14995 579 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 RPS6KA2Q15349 733 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 EXOC3L4Q17RC7 722 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SYCP2LQ5T4T6 812 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 KRT25Q7Z3Z0 450 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM178BQ8IXR5 827 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SIX5Q8N196 739 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 TTLL11Q8NHH1 800 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LRRC8CQ8TDW0 803 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LPGAT1Q92604 370 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 DPF2Q92785 391 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 CYFIP2Q96F07 1278 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF333Q96JL9 665 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SECISBP2Q96T21 854 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 DHRS9Q9BPW9 319 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 GPATCH1Q9BRR8 931 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 EIF2AQ9BY44 585 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 IL25Q9H293 177 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF408Q9H9D4 720 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SDHAF3Q9NRP4 125 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 NDUFA13Q9P0J0 144 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 SEPT10Q9P0V9 454 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 ZSWIM5Q9P217 1185 aa3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 FAF1Q9UNN5 650 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-208ENST00000504220 LAMB1P07942 1786 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MAST3O60307 1309 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A1B0GWJ7 208 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A1W2PRQ8 180 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 FUOMA2VDF0 154 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GOLGA8KD6RF30 607 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 H0YGN5 161 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 IFRD1O00458 451 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ALOX15BO15296 676 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GTPBP6O43824 516 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GAS7O60861 476 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CLN5O75503 358 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 RAD17O75943 681 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 OR6B1O95007 311 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 OR52Z1P0C646 297 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SMIM18P0DKX4 95 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 NR1D1P20393 614 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SEPHS1P49903 392 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ALDH5A1P51649 535 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 P2RX3P56373 397 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SNAP25P60880 206 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 RESTQ13127 1097 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF211Q13398 564 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SLMAPQ14BN4 828 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TMED2Q15363 201 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CNGA2Q16280 664 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 INAQ16352 499 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM102BQ5T8I3 360 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 USP17L2Q6R6M4 530 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TMPRSS9Q7Z410 1059 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 BEND7Q8N7W2 519 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 DACT3Q96B18 629 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PPWD1Q96BP3 646 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 FEM1CQ96JP0 617 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF317Q96PQ6 595 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ZSCAN10Q96SZ4 725 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ZPBPQ9BS86 351 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SERHL2Q9H4I8 314 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MLXIPQ9HAP2 919 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 HPS4Q9NQG7 708 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SMARCAL1Q9NZC9 954 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 FETUBQ9UGM5 382 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 POLG2Q9UHN1 485 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TFR2Q9UP52 801 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TRIM33Q9UPN9 1127 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 NFS1Q9Y697 457 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 IVNS1ABPQ9Y6Y0 642 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CARMIL3Q8ND23 1372 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 NRCAMQ92823 1304 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms