RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 PRDM11Q9NQV5 511 aa3.84□□□□□ -1.79
ATXN3-208ENST00000504047 KLC4Q9NSK0 619 aa3.84□□□□□ -1.79
ATXN3-208ENST00000504047 MRPS18AQ9NVS2 196 aaKnown RBP3.84□□□□□ -1.79
ATXN3-208ENST00000504047 ZSCAN32Q9NX65 697 aa3.84□□□□□ -1.79
ATXN3-208ENST00000504047 KLHL42Q9P2K6 505 aa3.84□□□□□ -1.79
ATXN3-208ENST00000504047 XPR1Q9UBH6 696 aa3.84□□□□□ -1.79
ATXN3-208ENST00000504047 SHOC2Q9UQ13 582 aa3.84□□□□□ -1.79
ATXN3-208ENST00000504047 CFAP69A5D8W1 941 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 VSTM5A8MXK1 200 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 CHRM2P08172 466 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 KITP10721 976 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 NPR1P16066 1061 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 SLC7A1P30825 629 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 PLA2G5P39877 138 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 VIPR2P41587 438 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 GRIA3P42263 894 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 RARRES1P49788 294 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 WNT3P56703 355 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 SIM1P81133 766 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-208ENST00000504047 RAB32Q13637 225 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 CNN3Q15417 329 aaKnown RBP3.83□□□□□ -1.8
ATXN3-208ENST00000504047 PRR16Q569H4 304 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 PLAC9Q5JTB6 97 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 ICE2Q659A1 982 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 CCDC149Q6ZUS6 474 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 FMNL3Q8IVF7 1028 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 DNAJC10Q8IXB1 793 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 CELF5Q8N6W0 485 aaKnown RBP3.83□□□□□ -1.8
ATXN3-208ENST00000504047 TFAP2BQ92481 460 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 TSR2Q969E8 191 aaKnown RBP3.83□□□□□ -1.8
ATXN3-208ENST00000504047 MRGPRX1Q96LB2 322 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 NT5C1BQ96P26 610 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 AMBRA1Q9C0C7 1298 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-208ENST00000504047 SLC17A6Q9P2U8 582 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 TPCN1Q9ULQ1 816 aa3.83□□□□□ -1.8
ATXN3-208ENST00000504047 FRMPD2Q68DX3 1309 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-208ENST00000504047 BTN3A1O00481 513 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 MGEA5O60502 916 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 TLR5O60602 858 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 NXPH3O95157 252 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 PPIFP30405 207 aaKnown RBP3.82□□□□□ -1.8
ATXN3-208ENST00000504047 LRPAP1P30533 357 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 SLC11A2P49281 568 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 TOB1P50616 345 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-208ENST00000504047 ELLP55199 621 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-208ENST00000504047 UCP3P55916 312 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 LILRA4P59901 499 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 FAM193AP78312 1265 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 KRT17Q04695 432 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 SLC13A2Q13183 592 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 E2F2Q14209 437 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 LLGL1Q15334 1064 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 TXNRD1Q16881 649 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 MGAT5BQ3V5L5 792 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 FAM153CQ494X1 144 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 AKNAD1Q5T1N1 836 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 DARS2Q6PI48 645 aaKnown RBP3.82□□□□□ -1.8
ATXN3-208ENST00000504047 KIAA0319LQ8IZA0 1049 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 MPP5Q8N3R9 675 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 SLC15A4Q8N697 577 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 DNAJC5GQ8N7S2 189 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 SIMC1Q8NDZ2 872 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 IL31RAQ8NI17 732 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 ATRIPQ8WXE1 791 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 FKBP10Q96AY3 582 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 PDLIM2Q96JY6 352 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 PBKQ96KB5 322 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 CRAMP1Q96RY5 1269 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 PTDSS2Q9BVG9 487 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 TRIM54Q9BYV2 358 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 LRRC27Q9C0I9 530 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 EHD3Q9NZN3 535 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 FOXJ2Q9P0K8 574 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 L1RE1Q9UN81 338 aa3.82□□□□□ -1.8
ATXN3-208ENST00000504047 SALL3Q9BXA9 1300 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 ISM1B1AKI9 464 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 ADM5C9JUS6 153 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 GCOM1H8Y6P7 765 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-208ENST00000504047 DCLK1O15075 740 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 FRS3O43559 492 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 URI1O94763 535 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-208ENST00000504047 TTLL1O95922 423 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 ZBED1O96006 694 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 BRAFP15056 766 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 EN2P19622 333 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-208ENST00000504047 HNRNPMP52272 730 aaKnown RBP eCLIP3.81□□□□□ -1.8
ATXN3-208ENST00000504047 ZNF134P52741 427 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 MAPK10P53779 464 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 CACNA2D1P54289 1103 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 BOP1Q14137 746 aaKnown RBP3.81□□□□□ -1.8
ATXN3-208ENST00000504047 GBX1Q14549 363 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 TBCCQ15814 346 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 ZNF618Q5T7W0 954 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 RNF220Q5VTB9 566 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 C14orf80Q86SX3 495 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 PEG10Q86TG7 708 aaKnown RBP3.81□□□□□ -1.8
ATXN3-208ENST00000504047 FAM109AQ8N4B1 249 aa3.81□□□□□ -1.8
ATXN3-208ENST00000504047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms