RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 SDHAF4Q5VUM1 108 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 SCARA3Q6AZY7 606 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 SPATA2LQ8IUW3 424 aaPredicted RBP23.66■■□□□ 1.38
LSM6-203ENST00000503982 GRAMD1CQ8IYS0 662 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 TOP6BLQ8N6T0 577 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 STKLD1Q8NE28 680 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 MMS19Q96T76 1030 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 SEMA4AQ9H3S1 761 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 AGPAT3Q9NRZ7 376 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 GDAP2Q9NXN4 497 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 SERTAD1Q9UHV2 236 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 GTF3C4Q9UKN8 822 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 COL4A2P08572 1712 aa23.66■■□□□ 1.38
LSM6-203ENST00000503982 PTPRJQ12913 1337 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 OBSL1O75147 1896 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 SLC38A8A6NNN8 435 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 CHADO15335 359 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 CSH1P0DML2 217 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 CSH2P0DML3 217 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 CCNE1P24864 410 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 RPL10AP62906 217 aaKnown RBP23.65■■□□□ 1.38
LSM6-203ENST00000503982 CUL4BQ13620 913 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 SNRNP35Q16560 246 aaKnown RBP23.65■■□□□ 1.38
LSM6-203ENST00000503982 CNNM4Q6P4Q7 775 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 EPM2AIP1Q7L775 607 aaPredicted RBP23.65■■□□□ 1.38
LSM6-203ENST00000503982 OSTM1Q86WC4 334 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 WDR49Q8IV35 697 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 SCN4BQ8IWT1 228 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 CCDC127Q96BQ5 260 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 RSPRY1Q96DX4 576 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 ZDHHC9Q9Y397 364 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 MYO15AQ9UKN7 3530 aa23.65■■□□□ 1.38
LSM6-203ENST00000503982 FANCMQ8IYD8 2048 aa23.64■■□□□ 1.38
LSM6-203ENST00000503982 CYP2F1P24903 491 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 HOXD13P35453 343 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 AVPR1AP37288 418 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 DDR2Q16832 855 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 ARHGAP29Q52LW3 1261 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 XXYLT1Q8NBI6 393 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 BPIFB1Q8TDL5 484 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 SCFD1Q8WVM8 642 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 MRPS31Q92665 395 aaKnown RBP23.64■■□□□ 1.37
LSM6-203ENST00000503982 ZFYVE19Q96K21 471 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 SMG9Q9H0W8 520 aaKnown RBP23.64■■□□□ 1.37
LSM6-203ENST00000503982 LMAN1LQ9HAT1 526 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 TRPV5Q9NQA5 729 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 THG1LQ9NWX6 298 aaKnown RBP23.64■■□□□ 1.37
LSM6-203ENST00000503982 FBXO4Q9UKT5 387 aa23.64■■□□□ 1.37
LSM6-203ENST00000503982 PVALEFA0A1B0GWK0 134 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 HCRTO43612 131 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 KINO60870 393 aaKnown RBP23.63■■□□□ 1.37
LSM6-203ENST00000503982 RPS9P46781 194 aaKnown RBP23.63■■□□□ 1.37
LSM6-203ENST00000503982 MAB21L3Q8N8X9 362 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 TTC16Q8NEE8 873 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 LEO1Q8WVC0 666 aaPredicted RBP23.63■■□□□ 1.37
LSM6-203ENST00000503982 CLDN23Q96B33 292 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 SPATA32Q96LK8 384 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 SYT15Q9BQS2 421 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 MKNK1Q9BUB5 465 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 IL21Q9HBE4 155 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 EXOC1Q9NV70 894 aa23.63■■□□□ 1.37
LSM6-203ENST00000503982 PTPRZ1P23471 2315 aaPredicted RBP23.62■■□□□ 1.37
LSM6-203ENST00000503982 TGFB1I1O43294 461 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 EXOC3O60645 756 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 PRAMEF12O95522 483 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 PDGFRBP09619 1106 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 SOX9P48436 509 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 SNRPFP62306 86 aaKnown RBP23.62■■□□□ 1.37
LSM6-203ENST00000503982 NUCB2P80303 420 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 CYP24A1Q07973 514 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 TRPC3Q13507 836 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 SOWAHAQ2M3V2 549 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 C4orf50Q6ZRC1 276 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 TRAPPC11Q7Z392 1133 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 CXorf38Q8TB03 319 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 SPATA18Q8TC71 538 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 ATRIPQ8WXE1 791 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 CGRRF1Q99675 332 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 SNX25Q9H3E2 840 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 C8orf33Q9H7E9 229 aaPredicted RBP23.62■■□□□ 1.37
LSM6-203ENST00000503982 OBP2AQ9NY56 170 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 UXTQ9UBK9 157 aaPredicted RBP23.62■■□□□ 1.37
LSM6-203ENST00000503982 RCOR1Q9UKL0 485 aa23.62■■□□□ 1.37
LSM6-203ENST00000503982 FAM186AA6NE01 2351 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 A0A1B0GVL5 298 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 PHACTR2O75167 634 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 PSMC1P62191 440 aaKnown RBP23.61■■□□□ 1.37
LSM6-203ENST00000503982 TNNC1P63316 161 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 KRT85P78386 507 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 FCHO2Q0JRZ9 810 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 PSMD6Q15008 389 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 TSSK4Q6SA08 328 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 DPH6Q7L8W6 267 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 MAML2Q8IZL2 1156 aaPredicted RBP23.61■■□□□ 1.37
LSM6-203ENST00000503982 CELF5Q8N6W0 485 aaKnown RBP23.61■■□□□ 1.37
LSM6-203ENST00000503982 MSANTD3Q96H12 275 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 SLC46A2Q9BY10 475 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 TRPC7Q9HCX4 862 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 ABCB6Q9NP58 842 aa23.61■■□□□ 1.37
LSM6-203ENST00000503982 MAGEC2Q9UBF1 373 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms