RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CXCL17Q6UXB2 119 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 FAM228AQ86W67 206 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 PIK3R5Q8WYR1 880 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 MRPL45Q9BRJ2 306 aaKnown RBP22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 SNX9Q9Y5X1 595 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 M0QYV0 167 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 PIRO00625 290 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 PGK1P00558 417 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 TCF4P15884 667 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 PSMC1P62191 440 aaKnown RBP22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 PDCLQ13371 301 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 LLGL1Q15334 1064 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 SMG8Q8ND04 991 aaKnown RBP22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 FNIP1Q8TF40 1166 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 ZIM3Q96PE6 472 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 TRIM31Q9BZY9 425 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 ZDHHC18Q9NUE0 388 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 VPS18Q9P253 973 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 IPPQ9Y573 584 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 DCAF8L1A6NGE4 600 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 RNF40O75150 1001 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 CD4P01730 458 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 KRT3P12035 628 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 RFC1P35251 1148 aaPredicted RBP22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 MRPS6P82932 125 aaKnown RBP22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 PRKCZQ05513 592 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 TRIM32Q13049 653 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 CYP4F22Q6NT55 531 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 MCRS1Q96EZ8 462 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 NME7Q9Y5B8 376 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 CASP8AP2Q9UKL3 1982 aa22.55■■□□□ 1.2
UBE2D3-216ENST00000503742 RALAP11233 206 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 FLT3P36888 993 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 CAP1Q01518 475 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 STILQ15468 1287 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 GDF6Q6KF10 455 aaPredicted RBP22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 ANKS1BQ7Z6G8 1248 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 CCDC105Q8IYK2 499 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 SMC1BQ8NDV3 1235 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 LRRC45Q96CN5 670 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 OSBPL8Q9BZF1 889 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 SPC25Q9HBM1 224 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 RNF19AQ9NV58 838 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 KLK14Q9P0G3 267 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 GOLGA8SH3BPF8 625 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 ADAMTS4O75173 837 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 ATF7P17544 494 aaPredicted RBP22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 SSR1P43307 286 aaKnown RBP22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 KCNJ1P48048 391 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 CACNB2Q08289 660 aaPredicted RBP22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 CFAP58Q5T655 872 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 CCDC50Q8IVM0 306 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 RCOR2Q8IZ40 523 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 JOSD2Q8TAC2 188 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 C1orf54Q8WWF1 131 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 GRHL1Q9NZI5 618 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 PARP2Q9UGN5 583 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 TSPAN16Q9UKR8 245 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 CDY2AQ9Y6F7 541 aa22.54■■□□□ 1.2
UBE2D3-216ENST00000503742 PFKMP08237 780 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 RARBP10826 455 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 GYS2P54840 703 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 ATP13A4Q4VNC1 1196 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 ARRDC4Q8NCT1 418 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 UBA3Q8TBC4 463 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 DCLK3Q9C098 648 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 CHST7Q9NS84 486 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 ADAM21Q9UKJ8 722 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 SNX24Q9Y343 169 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 TRPV2Q9Y5S1 764 aa22.53■■□□□ 1.2
UBE2D3-216ENST00000503742 XPOTO43592 962 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 GJC1P36383 396 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 NFX1Q12986 1120 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 SOWAHAQ2M3V2 549 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 PKDCCQ504Y2 493 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 ZDHHC24Q6UX98 284 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 UNC93AQ86WB7 457 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 C12orf29Q8N999 325 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 RBM41Q96IZ5 413 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 SYNCQ9H7C4 482 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 KIF3CO14782 793 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 OPA1O60313 960 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 GBP1P32455 592 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 RPL21P46778 160 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 UAP1Q16222 522 aaPredicted RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 FBXO47Q5MNV8 452 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 PAXIP1Q6ZW49 1069 aaPredicted RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 TMC3Q7Z5M5 1100 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 WNT8BQ93098 351 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 SLITRK1Q96PX8 696 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 FMO2Q99518 471 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 HEMGNQ9BXL5 484 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 TXLNGYQ9BZA5 131 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 METTL5Q9NRN9 209 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 HOMER3Q9NSC5 361 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 GDAP2Q9NXN4 497 aa22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 R3HDM2Q9Y2K5 976 aaKnown RBP22.52■■□□□ 1.2
UBE2D3-216ENST00000503742 M0QZ92 97 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 ECEL1O95672 775 aa22.51■■□□□ 1.19
UBE2D3-216ENST00000503742 PSMA2P25787 234 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms