RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 FOLR3P41439 243 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 CXADRP78310 365 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 SEMA5AQ13591 1074 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 UBXN2BQ14CS0 331 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 SRSF7Q16629 238 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 PABPC1LQ4VXU2 614 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 KHDC1LQ5JSQ8 128 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 SYCP2LQ5T4T6 812 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 ATXN7L2Q5T6C5 722 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 IL31Q6EBC2 164 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 PPP1R3BQ86XI6 285 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM90A1Q86YD7 464 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 CELF5Q8N6W0 485 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 RNF169Q8NCN4 708 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 IL17RDQ8NFM7 739 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 BRIX1Q8TDN6 353 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 LRTOMTQ8WZ04 291 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 TNPO1Q92973 898 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 C1orf43Q9BWL3 253 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 MRPL46Q9H2W6 279 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 RNPEPQ9H4A4 650 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 GSTO2Q9H4Y5 243 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 ZMAT3Q9HA38 289 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 SARS2Q9NP81 518 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLAMF7Q9NQ25 335 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 CHST12Q9NRB3 414 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 GNL3LQ9NVN8 582 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 USP25Q9UHP3 1055 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 PCDHA6Q9UN73 950 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 CNTNAP2Q9UHC6 1331 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 ANO9A1A5B4 782 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PMM2O15305 246 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PHGDHO43175 533 aaKnown RBP3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PQBP1O60828 265 aaKnown RBP3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PEX14O75381 377 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 MOSPD3O75425 235 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 GNAI3P08754 354 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 KITP10721 976 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 ALAS1P13196 640 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLC6A4P31645 630 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PHKA1P46020 1223 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PIK3CGP48736 1102 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 NEK3P51956 506 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 CHN2P52757 468 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 GNAI1P63096 354 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLC10A2Q12908 348 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PICALMQ13492 652 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 HDAC1Q13547 482 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 UBE4AQ14139 1066 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 NBPF8Q3BBV2 869 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 CCDC93Q567U6 631 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 APOA5Q6Q788 366 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 NLGN4YQ8NFZ3 816 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PHACTR3Q96KR7 559 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 APOL5Q9BWW9 433 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 PACSIN1Q9BY11 444 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 C22orf23Q9BZE7 217 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 ATP6V0A4Q9HBG4 840 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 CNNM1Q9NRU3 951 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 FBXO34Q9NWN3 711 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 ASB6Q9NWX5 421 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 SIDT1Q9NXL6 827 aaKnown RBP3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 TPCN1Q9ULQ1 816 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 BTBD3Q9Y2F9 522 aa3.03□□□□□ -1.92
HMGB1P35-201ENST00000503360 USP19O94966 1318 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 A0A1B0GTW7 788 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 CDHR4A6H8M9 788 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 MGEA5O60502 916 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC43A1O75387 559 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 HAUS5O94927 633 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 GJB1P08034 283 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 MYL3P08590 195 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 IFIT2P09913 472 aaKnown RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC5A1P13866 664 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 NPR1P16066 1061 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 HDCP19113 662 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC6A2P23975 617 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 ITPKBP27987 946 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SLC7A1P30825 629 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 KCNJ5P48544 419 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SOX8P57073 446 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 RHBDL3P58872 404 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 TUBA4AP68366 448 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 NOMO3P69849 1222 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 EXOSC9Q06265 439 aaKnown RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 POLD3Q15054 466 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 BRD3Q15059 726 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 AKNAD1Q5T1N1 836 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 UTP14CQ5TAP6 766 aaKnown RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 MED25Q71SY5 747 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 COLGALT2Q8IYK4 626 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SEMA6DQ8NFY4 1073 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 SVIPQ8NHG7 77 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 IL31RAQ8NI17 732 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 TBC1D15Q8TC07 691 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 PARD3BQ8TEW8 1205 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 RPL36ALQ969Q0 106 aaKnown RBP3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 APIPQ96GX9 242 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 MRGPRX1Q96LB2 322 aa3.02□□□□□ -1.93
HMGB1P35-201ENST00000503360 MPHOSPH6Q99547 160 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms