RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 NPY5RQ15761 445 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 TMTC4Q5T4D3 741 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 INTS11Q5TA45 600 aaKnown RBP6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 RAP1GAP2Q684P5 730 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 FCRL6Q6DN72 434 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 SULT6B1Q6IMI4 303 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 LIN54Q6MZP7 749 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 ARHGEF18Q6ZSZ5 1173 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 PLEKHH3Q7Z736 793 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 PCGF5Q86SE9 256 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 MOGAT3Q86VF5 341 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 CFAP52Q8N1V2 620 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 PPHLN1Q8NEY8 458 aaKnown RBP6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 OTUD7AQ8TE49 926 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 RUBCNQ92622 972 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 PPM1MQ96MI6 270 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 SLC46A1Q96NT5 459 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 TLR10Q9BXR5 811 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 ETAA1Q9NY74 926 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 FBXO9Q9UK97 447 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 ATP11BQ9Y2G3 1177 aa6.18□□□□□ -1.42
HMGB1P3-201ENST00000502802 AQP7P3A6NL99 342 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 DCLK1O15075 740 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 MFAP3LO75121 409 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 GLP2RO95838 553 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 ITGA2BP08514 1039 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 C1QTNF9P0C862 333 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 NPPBP16860 134 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 ATICP31939 592 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 RPS19P39019 145 aaKnown RBP6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 PTDSS1P48651 473 aaKnown RBP6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 SLURP1P55000 103 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 SATB1Q01826 763 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 CNGB1Q14028 1251 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 BOP1Q14137 746 aaKnown RBP6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 GRM7Q14831 915 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 SLC5A9Q2M3M2 681 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 VMACQ2NL98 169 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 MGAT5BQ3V5L5 792 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 METTL24Q5JXM2 366 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 FBXO47Q5MNV8 452 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 FAXCQ5TGI0 409 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 KLHL17Q6TDP4 642 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 TMEM151BQ8IW70 566 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 CCDC28AQ8IWP9 274 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 ZFPM1Q8IX07 1006 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 ST8SIA2Q92186 375 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 SKA1Q96BD8 255 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 TMEM176AQ96HP8 235 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 PHACTR3Q96KR7 559 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 LMF1Q96S06 567 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 TTYH3Q9C0H2 523 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 FAM83DQ9H4H8 585 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 KIF17Q9P2E2 1029 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 SRP68Q9UHB9 627 aaKnown RBP6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 SHOC2Q9UQ13 582 aa6.17□□□□□ -1.42
HMGB1P3-201ENST00000502802 J3KRW8 73 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 EYA2O00167 538 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 COQ9O75208 318 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 IPO13O94829 963 aaKnown RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 INHBBP09529 407 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 ATXN1LP0C7T5 689 aaKnown RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 FCER1AP12319 257 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 GCSHP23434 173 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 BDNFP23560 247 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 TOB1P50616 345 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 CHN2P52757 468 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 GEMIN4P57678 1058 aaKnown RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 LINC00310P59036 64 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 PPP2CBP62714 309 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 PPP2CAP67775 309 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 TRIM71Q2Q1W2 868 aaKnown RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 MRNIPQ6NTE8 343 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 CCDC117Q8IWD4 279 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 ELOA2Q8IYF1 753 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 COLGALT2Q8IYK4 626 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 OR52N2Q8NGI0 321 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 SPPL3Q8TCT6 385 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 LRRC37BQ96QE4 947 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 TRIB1Q96RU8 372 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 PLA2G12BQ9BX93 195 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 REXO4Q9GZR2 422 aaKnown RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 ZBTB26Q9HCK0 441 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 SAYSD1Q9NPB0 183 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 DNMT3BQ9UBC3 853 aaKnown RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 SWAP70Q9UH65 585 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 CA14Q9ULX7 337 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 CDYLQ9Y232 598 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 CRYL1Q9Y2S2 319 aa6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 MTO1Q9Y2Z2 717 aaKnown RBP6.16□□□□□ -1.42
HMGB1P3-201ENST00000502802 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 A0A0B4J269 797 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 FCHO1O14526 889 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 RRP9O43818 475 aaKnown RBP6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 NOBOXO60393 691 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 TRIM13O60858 407 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 FAM155BO75949 473 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 FARP2O94887 1054 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 CENPBP07199 599 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms