RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PLEKHH3Q7Z736 793 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 LRRC52Q8N7C0 313 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 ATP11CQ8NB49 1132 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 DDX1Q92499 740 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 ABTB1Q969K4 478 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 TMEM176AQ96HP8 235 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 PPP1R2P1Q96PQ5 205 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 CNPY3Q9BT09 278 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 TAS2R14Q9NYV8 317 aa7.79□□□□□ -1.16
PDGFC-203ENST00000502773 NXF1Q9UBU9 619 aaKnown RBP7.79□□□□□ -1.16
PDGFC-203ENST00000502773 TMEM191CA6NGB0 347 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 A6NJR5 290 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 EIF4E1BA6NMX2 242 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 BHMG1C9JSJ3 638 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ITGAVP06756 1048 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 MYBL2P10244 700 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 HOXD11P31277 338 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 STX2P32856 288 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ITIH4Q14624 930 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 RASA2Q15283 850 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 IZUMO3Q5VZ72 239 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 SLC39A4Q6P5W5 647 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PALM2Q8IXS6 379 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 STK32AQ8WU08 396 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 SMC6Q96SB8 1091 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 POP1Q99575 1024 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 KCNK9Q9NPC2 374 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 EHD2Q9NZN4 543 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PTPN22Q9Y2R2 807 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CCDC160A6NGH7 325 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 SGK1O00141 431 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 MEFVO15553 781 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 MSCO60682 206 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 HNRNPCL1O60812 293 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CORO7P57737 925 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 INHBEP58166 350 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 WDR72Q3MJ13 1102 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CCDC92Q53HC0 331 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CAPRIN2Q6IMN6 1127 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CATSPER4Q7RTX7 472 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CDKL3Q8IVW4 592 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CCDC13Q8IYE1 715 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 TSEN2Q8NCE0 465 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 HPDLQ96IR7 371 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 TRIM51Q9BSJ1 452 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 SMARCAL1Q9NZC9 954 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 AJAP1Q9UKB5 411 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 COG5Q9UP83 839 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 Q9Y3F1 56 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 USH1CQ9Y6N9 552 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ADGRA2Q96PE1 1338 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 IQANK1A0A1B0GTG1 560 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ZNF487B1APH4 448 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 RGS20O76081 388 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 VIMP08670 466 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 STAG3L1P0CL83 205 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ZBTB48P10074 688 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ITGA4P13612 1032 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 SDC4P31431 198 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 GJC1P36383 396 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 GRM5P41594 1212 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PTGIRP43119 386 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PTPN11Q06124 597 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 SPOCD1Q6ZMY3 1216 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 RINLQ6ZS11 566 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 DPH6Q7L8W6 267 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ADAT2Q7Z6V5 191 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 RFX6Q8HWS3 928 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PPIL6Q8IXY8 311 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 OR6J1Q8NGC5 347 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CCT8L2Q96SF2 557 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 KDM4CQ9H3R0 1056 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PPANQ9NQ55 473 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 RRN3Q9NYV6 651 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 BTBD7Q9P203 1132 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PAK5Q9P286 719 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 KLHL14Q9P2G3 628 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 NRCAMQ92823 1304 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 RBM47A0AV96 593 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 RIPK2O43353 540 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 GHRP10912 638 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 CD58P19256 250 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 MARK3P27448 753 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 VCPP55072 806 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 SV2CQ496J9 727 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 EFHC1Q5JVL4 640 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ACBD5Q5T8D3 534 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ZCCHC9Q8N567 271 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 FBXO25Q8TCJ0 367 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 ALG3Q92685 438 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 NKD2Q969F2 451 aaPredicted RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 XPO6Q96QU8 1125 aaKnown RBP7.78□□□□□ -1.16
PDGFC-203ENST00000502773 PI4K2AQ9BTU6 479 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 KLC2Q9H0B6 622 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 HAUS2Q9NVX0 235 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 MORF4L1Q9UBU8 362 aa7.78□□□□□ -1.16
PDGFC-203ENST00000502773 FER1L6Q2WGJ9 1857 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms