RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 LRRC57Q8N9N7 239 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 C1orf131Q8NDD1 294 aaKnown RBP17.37■□□□□ 0.37
CSF1R-202ENST00000502660 TRIM43Q96BQ3 446 aaPredicted RBP17.37■□□□□ 0.37
CSF1R-202ENST00000502660 SUSD3Q96L08 255 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 NUP85Q9BW27 656 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 OSGEPQ9NPF4 335 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 CACNG4Q9UBN1 327 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 STRIP2Q9ULQ0 834 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 NME7Q9Y5B8 376 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 SCINQ9Y6U3 715 aa17.37■□□□□ 0.37
CSF1R-202ENST00000502660 TET1Q8NFU7 2136 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 MYH10P35580 1976 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 M0QYV0 167 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 TRAPPC3O43617 180 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 ATP1A1P05023 1023 aaKnown RBP17.36■□□□□ 0.37
CSF1R-202ENST00000502660 ALDH2P05091 517 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 PTPN1P18031 435 aaKnown RBP17.36■□□□□ 0.37
CSF1R-202ENST00000502660 TYMPP19971 482 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 IGFBP6P24592 240 aaPredicted RBP17.36■□□□□ 0.37
CSF1R-202ENST00000502660 PCSK1P29120 753 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 GPD2P43304 727 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 PPP1R26Q5T8A7 1209 aaPredicted RBP17.36■□□□□ 0.37
CSF1R-202ENST00000502660 MEI1Q5TIA1 1274 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 PLEKHA7Q6IQ23 1121 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 MMS22LQ6ZRQ5 1243 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 DAAM2Q86T65 1068 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 C12orf29Q8N999 325 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 ZNF564Q8TBZ8 553 aaPredicted RBP17.36■□□□□ 0.37
CSF1R-202ENST00000502660 RABGGTAQ92696 567 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 C11orf70Q9BRQ4 267 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 TMEM175Q9BSA9 504 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 COLEC11Q9BWP8 271 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 PRDM5Q9NQX1 630 aaPredicted RBP17.36■□□□□ 0.37
CSF1R-202ENST00000502660 PARVAQ9NVD7 372 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 WDR35Q9P2L0 1181 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 LCMT1Q9UIC8 334 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 CDC23Q9UJX2 597 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 TSPAN16Q9UKR8 245 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 CDH9Q9ULB4 789 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 PCDHB8Q9UN66 801 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 COG5Q9UP83 839 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 SAR1BQ9Y6B6 198 aa17.36■□□□□ 0.37
CSF1R-202ENST00000502660 ENC1O14682 589 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 BUB1BO60566 1050 aaPredicted RBP17.35■□□□□ 0.37
CSF1R-202ENST00000502660 KIF4AO95239 1232 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 RRM1P23921 792 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 OR1G1P47890 313 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 AMPD2Q01433 879 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 TAP1Q03518 808 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 ZNF268Q14587 947 aaPredicted RBP17.35■□□□□ 0.37
CSF1R-202ENST00000502660 GOLGA7BQ2TAP0 167 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 PKDCCQ504Y2 493 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 C11orf63Q6NUN7 778 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 THEM5Q8N1Q8 247 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 ANKRD52Q8NB46 1076 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 B3GALNT2Q8NCR0 500 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 STK32AQ8WU08 396 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 C18orf8Q96DM3 657 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 VWCEQ96DN2 955 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 HNRNPABQ99729 332 aaKnown RBP17.35■□□□□ 0.37
CSF1R-202ENST00000502660 DPEP3Q9H4B8 488 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 NRDE2Q9H7Z3 1164 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 ABCB6Q9NP58 842 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 DDX43Q9NXZ2 648 aaKnown RBP17.35■□□□□ 0.37
CSF1R-202ENST00000502660 AMFRQ9UKV5 643 aa17.35■□□□□ 0.37
CSF1R-202ENST00000502660 TBKBP1A7MCY6 615 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 RIOK3O14730 519 aaKnown RBP17.34■□□□□ 0.37
CSF1R-202ENST00000502660 TADA2AO75478 443 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 AMHP03971 560 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 TCP1P17987 556 aaKnown RBP17.34■□□□□ 0.37
CSF1R-202ENST00000502660 BRCC3P46736 316 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 GABRB2P47870 512 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 TERF1P54274 439 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 RPS6KA1Q15418 735 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.34■□□□□ 0.37
CSF1R-202ENST00000502660 PEX26Q7Z412 305 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 UBA3Q8TBC4 463 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 ACBD6Q9BR61 282 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 TLR10Q9BXR5 811 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 CYLDQ9NQC7 956 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 SNX12Q9UMY4 172 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 HYOU1Q9Y4L1 999 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 MRFAP1Q9Y605 127 aa17.34■□□□□ 0.37
CSF1R-202ENST00000502660 FAM170AA1A519 330 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 ATMINO43313 823 aaPredicted RBP17.33■□□□□ 0.36
CSF1R-202ENST00000502660 CSF2RAP15509 400 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 BCAT1P54687 386 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 GSCP56915 257 aaPredicted RBP17.33■□□□□ 0.36
CSF1R-202ENST00000502660 MAMLD1Q13495 774 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 WHAMMP3Q1A5X7 153 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 NT5DC3Q86UY8 548 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 SYT15Q9BQS2 421 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 SYNCQ9H7C4 482 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 FAM49BQ9NUQ9 324 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 CYTH4Q9UIA0 394 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 FAN1Q9Y2M0 1017 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 ALG6Q9Y672 507 aa17.33■□□□□ 0.36
CSF1R-202ENST00000502660 TNRC18O15417 2968 aaPredicted RBP17.33■□□□□ 0.36
CSF1R-202ENST00000502660 PDE4DIPQ5VU43 2346 aa17.32■□□□□ 0.36
CSF1R-202ENST00000502660 MICAL3Q7RTP6 2002 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms