RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 RESP18Q5W5W9 173 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 LMBRD2Q68DH5 695 aaPredicted RBP21.18■□□□□ 0.98
SFXN1-203ENST00000502393 MAMSTRQ6ZN01 415 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 GPIHBP1Q8IV16 184 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 WDR49Q8IV35 697 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 ADGRF2Q8IZF7 708 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 OR5B17Q8NGF7 314 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 FAM84AQ96KN4 292 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 LRRC3BQ96PB8 259 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 IER2Q9BTL4 223 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 PI4K2AQ9BTU6 479 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 C8orf33Q9H7E9 229 aaPredicted RBP21.18■□□□□ 0.98
SFXN1-203ENST00000502393 AGPAT3Q9NRZ7 376 aa21.18■□□□□ 0.98
SFXN1-203ENST00000502393 PVALEFA0A1B0GWK0 134 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 PRPF40AO75400 957 aaKnown RBP21.17■□□□□ 0.98
SFXN1-203ENST00000502393 CSH1P0DML2 217 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 CSH2P0DML3 217 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 HMGA1P17096 107 aaKnown RBP21.17■□□□□ 0.98
SFXN1-203ENST00000502393 PCSK1P29120 753 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 SNRNP35Q16560 246 aaKnown RBP21.17■□□□□ 0.98
SFXN1-203ENST00000502393 SOWAHAQ2M3V2 549 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 LIMS2Q7Z4I7 341 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 SCFD1Q8WVM8 642 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 HPDLQ96IR7 371 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 PKMYT1Q99640 499 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 SLC46A2Q9BY10 475 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 CHRDQ9H2X0 955 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 PCDHGA2Q9Y5H1 932 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 PTPRJQ12913 1337 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 TICRRQ7Z2Z1 1910 aa21.17■□□□□ 0.98
SFXN1-203ENST00000502393 CACNA1IQ9P0X4 2223 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 NUP210Q8TEM1 1887 aaPredicted RBP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 SOBPA7XYQ1 873 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 KINO60870 393 aaKnown RBP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 F11P03951 625 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 ACAT1P24752 427 aaKnown RBP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 CCNE1P24864 410 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 DDX6P26196 483 aaKnown RBP eCLIP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 KPNA1P52294 538 aaPredicted RBP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 RPL10AP62906 217 aaKnown RBP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 PLCB2Q00722 1185 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 MTAPQ13126 283 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 PKP1Q13835 747 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 TMEM150AQ86TG1 271 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 OSTM1Q86WC4 334 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 CMTM8Q8IZV2 173 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 BPIFB1Q8TDL5 484 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 BLZF1Q9H2G9 400 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 LMAN1LQ9HAT1 526 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 PRMT8Q9NR22 394 aaPredicted RBP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 CGNQ9P2M7 1197 aaKnown RBP21.16■□□□□ 0.98
SFXN1-203ENST00000502393 RCOR1Q9UKL0 485 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 GTF3C4Q9UKN8 822 aa21.16■□□□□ 0.98
SFXN1-203ENST00000502393 PRAMEF12O95522 483 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 CYP2F1P24903 491 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 NLRP12P59046 1061 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 DNM1Q05193 864 aaKnown RBP21.15■□□□□ 0.98
SFXN1-203ENST00000502393 BMT2Q1RMZ1 405 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 CFAP221Q4G0U5 840 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 HS2ST1Q7LGA3 356 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 NELFCDQ8IXH7 590 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 CELF5Q8N6W0 485 aaKnown RBP21.15■□□□□ 0.98
SFXN1-203ENST00000502393 XXYLT1Q8NBI6 393 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 RDH13Q8NBN7 331 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 ATRIPQ8WXE1 791 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 NELL1Q92832 810 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 FUBP3Q96I24 572 aaKnown RBP eCLIP21.15■□□□□ 0.98
SFXN1-203ENST00000502393 FNBP1Q96RU3 617 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 FAM126AQ9BYI3 521 aaPredicted RBP21.15■□□□□ 0.98
SFXN1-203ENST00000502393 THG1LQ9NWX6 298 aaKnown RBP21.15■□□□□ 0.98
SFXN1-203ENST00000502393 ZSCAN32Q9NX65 697 aa21.15■□□□□ 0.98
SFXN1-203ENST00000502393 UXTQ9UBK9 157 aaPredicted RBP21.15■□□□□ 0.98
SFXN1-203ENST00000502393 FANCMQ8IYD8 2048 aa21.14■□□□□ 0.98
SFXN1-203ENST00000502393 MYBPHLA2RUH7 354 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 SLC38A8A6NNN8 435 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 CHRNB1P11230 501 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 CASP1P29466 404 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 AVPR1AP37288 418 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 AFMP43652 599 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 GPR15P49685 360 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 CUL4BQ13620 913 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 PPP2R5DQ14738 602 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 PSMD6Q15008 389 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 DDR2Q16832 855 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 FAM171BQ6P995 826 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 TRAPPC11Q7Z392 1133 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 RALGPS2Q86X27 583 aaPredicted RBP21.14■□□□□ 0.97
SFXN1-203ENST00000502393 SPATA2LQ8IUW3 424 aaPredicted RBP21.14■□□□□ 0.97
SFXN1-203ENST00000502393 CEP57L1Q8IYX8 460 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 ZBTB44Q8NCP5 570 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 ZFYVE19Q96K21 471 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 SLC39A2Q9NP94 309 aa21.14■□□□□ 0.97
SFXN1-203ENST00000502393 MAGED2Q9UNF1 606 aaPredicted RBP21.14■□□□□ 0.97
SFXN1-203ENST00000502393 RIF1Q5UIP0 2472 aaKnown RBP21.13■□□□□ 0.97
SFXN1-203ENST00000502393 SPECC1L-ADORA2AF8WAN1 911 aa21.13■□□□□ 0.97
SFXN1-203ENST00000502393 CLIC2O15247 247 aa21.13■□□□□ 0.97
SFXN1-203ENST00000502393 NOL4O94818 638 aa21.13■□□□□ 0.97
SFXN1-203ENST00000502393 SLFN14P0C7P3 912 aa21.13■□□□□ 0.97
SFXN1-203ENST00000502393 DLATP10515 647 aaKnown RBP21.13■□□□□ 0.97
SFXN1-203ENST00000502393 TNNI1P19237 187 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms