RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 LMBRD2Q68DH5 695 aaPredicted RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 BLOC1S2Q6QNY1 142 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 TAOK1Q7L7X3 1001 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 MCEMP1Q8IX19 187 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 GPR65Q8IYL9 337 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 ZNF444Q8N0Y2 327 aaPredicted RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 NME8Q8N427 588 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 NCOA7Q8NI08 942 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 ZSCAN18Q8TBC5 510 aaPredicted RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 ESR2Q92731 530 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 JAKMIP1Q96N16 626 aaKnown RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 TMEM175Q9BSA9 504 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 TM6SF1Q9BZW5 370 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 GAREM1Q9H706 876 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 ERAP1Q9NZ08 941 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 PNMA2Q9UL42 364 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 KIAA1024Q9UPX6 916 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.79□□□□□ -1.48
FXN-205ENST00000498653 PRG3Q9Y2Y8 225 aaPredicted RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 ZNF106Q9H2Y7 1883 aaKnown RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 TP53BP1Q12888 1972 aaPredicted RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 NEDD4P46934 1319 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 ANTXRLA6NF34 631 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 RRN3P2A6NIE6 340 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 A6NJY4 79 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 TSPY2A6NKD2 308 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 CDK2AP1O14519 115 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 ADAM12O43184 909 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 AP5Z1O43299 807 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 PRDM1O75626 825 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 OFD1O75665 1012 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 MPOP05164 745 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 FGRP09769 529 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 MYCLP12524 364 aaPredicted RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 MCM5P33992 734 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 SP4Q02446 784 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 RPL6Q02878 288 aaKnown RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 RABEP1Q15276 862 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 TBR1Q16650 682 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 ADCK5Q3MIX3 580 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 LONRF3Q496Y0 759 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 CCDC178Q5BJE1 867 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 AXDND1Q5T1B0 1012 aaPredicted RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 FOXD4L5Q5VV16 416 aaPredicted RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 PRSS55Q6UWB4 352 aaPredicted RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 STOX1Q6ZVD7 989 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 DHX32Q7L7V1 743 aaKnown RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 TAS1R3Q7RTX0 852 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 TIPARPQ7Z3E1 657 aaKnown RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 YAF2Q8IY57 180 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 KIAA0319LQ8IZA0 1049 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 DCBLD1Q8N8Z6 715 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 NIFKQ9BYG3 293 aaKnown RBP5.78□□□□□ -1.48
FXN-205ENST00000498653 GRIP2Q9C0E4 1043 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 TMEM245Q9H330 911 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 FAN1Q9Y2M0 1017 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 PCDHB1Q9Y5F3 818 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 HRH3Q9Y5N1 445 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 CYP46A1Q9Y6A2 500 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 MYH6P13533 1939 aa5.78□□□□□ -1.48
FXN-205ENST00000498653 SHANK1Q9Y566 2161 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 ERICH2A1L162 156 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 OTOL1A6NHN0 477 aaPredicted RBP5.77□□□□□ -1.49
FXN-205ENST00000498653 SFI1A8K8P3 1242 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 SPATA31C2B4DYI2 1134 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 CBX4O00257 560 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 KCNAB3O43448 404 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 PRC1O43663 620 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 GPR32O75388 356 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 MICAL2O94851 1124 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 CER1O95813 267 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 LDLRP01130 860 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 KRT7P08729 469 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 TSPY3P0CV98 308 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 TSPY8P0CW00 308 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 ZSCAN20P17040 1043 aaPredicted RBP5.77□□□□□ -1.49
FXN-205ENST00000498653 GLDCP23378 1020 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 RPS6KB1P23443 525 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 U2AF2P26368 475 aaKnown RBP eCLIP5.77□□□□□ -1.49
FXN-205ENST00000498653 MATKP42679 507 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 ACADVLP49748 655 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 CDR1P51861 262 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 NEK4P51957 841 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 CRYBB1P53674 252 aaPredicted RBP5.77□□□□□ -1.49
FXN-205ENST00000498653 TFAP4Q01664 338 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 SART3Q15020 963 aaKnown RBP5.77□□□□□ -1.49
FXN-205ENST00000498653 PGM5Q15124 567 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 SWI5Q1ZZU3 235 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 ZNF484Q5JVG2 852 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 MTHFD1LQ6UB35 978 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 GLB1LQ6UWU2 654 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 RUFY3Q7L099 469 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 CYB5R4Q7L1T6 521 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 RSRC2Q7L4I2 434 aaKnown RBP5.77□□□□□ -1.49
FXN-205ENST00000498653 C12orf40Q86WS4 652 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 IQCA1Q86XH1 822 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 MB21D2Q8IYB1 491 aaPredicted RBP5.77□□□□□ -1.49
FXN-205ENST00000498653 CACTIN-AS1Q8N1I8 211 aa5.77□□□□□ -1.49
FXN-205ENST00000498653 NEDD1Q8NHV4 660 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms