RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 LIMS2Q7Z4I7 341 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 SPATA2LQ8IUW3 424 aaPredicted RBP12.19□□□□□ -0.46
CTTN-208ENST00000498223 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
CTTN-208ENST00000498223 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 ZNF397Q8NF99 534 aaPredicted RBP12.19□□□□□ -0.46
CTTN-208ENST00000498223 OR10T2Q8NGX3 314 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 ADAMTS19Q8TE59 1207 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 TMEM176AQ96HP8 235 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 PGLYRP2Q96PD5 576 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 RTP3Q9BQQ7 232 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 ZCWPW1Q9H0M4 648 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 DPEP3Q9H4B8 488 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
CTTN-208ENST00000498223 NSUN3Q9H649 340 aaKnown RBP12.19□□□□□ -0.46
CTTN-208ENST00000498223 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 HMGXB4Q9UGU5 601 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 AJAP1Q9UKB5 411 aaPredicted RBP12.19□□□□□ -0.46
CTTN-208ENST00000498223 GTF3C4Q9UKN8 822 aa12.19□□□□□ -0.46
CTTN-208ENST00000498223 ZNF638Q14966 1978 aaKnown RBP12.19□□□□□ -0.46
CTTN-208ENST00000498223 ATP8B3O60423 1300 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ITIH6Q6UXX5 1313 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 FOXN3O00409 490 aaPredicted RBP12.18□□□□□ -0.46
CTTN-208ENST00000498223 ADAM12O43184 909 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 LILRB3O75022 631 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 NOL4O94818 638 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 SPATA31D3P0C874 917 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 PBX1P40424 430 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 STAT1P42224 750 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 RAD23BP54727 409 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ROR1Q01973 937 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ARID5AQ03989 594 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 GSE1Q14687 1217 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 MAPRE1Q15691 268 aaKnown RBP12.18□□□□□ -0.46
CTTN-208ENST00000498223 NFE2Q16621 373 aaPredicted RBP12.18□□□□□ -0.46
CTTN-208ENST00000498223 SPECC1LQ69YQ0 1117 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 DPY19L2P1Q6NXN4 242 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 LLGL2Q6P1M3 1020 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ELMSAN1Q6PJG2 1045 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 SPATA31D4Q6ZUB0 917 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ADGRD2Q7Z7M1 963 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 VSTM4Q8IW00 320 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 WHAMMQ8TF30 809 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ANP32BQ92688 251 aaKnown RBP12.18□□□□□ -0.46
CTTN-208ENST00000498223 IQCDQ96DY2 449 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 TWNKQ96RR1 684 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 UHRF1Q96T88 793 aaPredicted RBP12.18□□□□□ -0.46
CTTN-208ENST00000498223 LPIN3Q9BQK8 851 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 STK33Q9BYT3 514 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ELOVL4Q9GZR5 314 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 FAM49BQ9NUQ9 324 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 ABI2Q9NYB9 513 aaPredicted RBP12.18□□□□□ -0.46
CTTN-208ENST00000498223 LMCD1Q9NZU5 365 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 COG5Q9UP83 839 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 PCDHB5Q9Y5E4 795 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 IRAK3Q9Y616 596 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 TRANK1O15050 2925 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 MYO16Q9Y6X6 1858 aa12.18□□□□□ -0.46
CTTN-208ENST00000498223 GREB1Q4ZG55 1949 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 DOCK6Q96HP0 2047 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 MYBPHLA2RUH7 354 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 GOLGA6L6A8MZA4 724 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 PRRG1O14668 218 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 CYP26A1O43174 497 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 THAP12O43422 761 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 TBC1D4O60343 1298 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 CLASP2O75122 1294 aaKnown RBP12.17□□□□□ -0.46
CTTN-208ENST00000498223 GFPT2O94808 682 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 GLUD1P00367 558 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 PNMA6AP0CW24 399 aaPredicted RBP12.17□□□□□ -0.46
CTTN-208ENST00000498223 ACO1P21399 889 aaKnown RBP12.17□□□□□ -0.46
CTTN-208ENST00000498223 ADORA2BP29275 332 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 SOX5P35711 763 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 MRE11P49959 708 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 BPIFB4P59827 614 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 TFF2Q03403 129 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 PTK2Q05397 1052 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 GPR17Q13304 367 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 RAB33AQ14088 237 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 TRIM14Q14142 442 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 TSR1Q2NL82 804 aaKnown RBP12.17□□□□□ -0.46
CTTN-208ENST00000498223 SGO2Q562F6 1265 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 TCEAL5Q5H9L2 206 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 TPGS2Q68CL5 300 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 SLC8B1Q6J4K2 584 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 RSPO2Q6UXX9 243 aaPredicted RBP12.17□□□□□ -0.46
CTTN-208ENST00000498223 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 LRRTM3Q86VH5 581 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 UBR7Q8N806 425 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 SLC4A11Q8NBS3 891 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 MYCBPAPQ8TBZ2 947 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 SHC3Q92529 594 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 MRFAP1L1Q96HT8 127 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 CYP4F11Q9HBI6 524 aa12.17□□□□□ -0.46
CTTN-208ENST00000498223 CRTAC1Q9NQ79 661 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms