RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 RAVER1Q8IY67 606 aaKnown RBP5.95□□□□□ -1.46
SSR3-209ENST00000498205 ZBTB34Q8NCN2 500 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 TMEM125Q96AQ2 219 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 SUCLG2Q96I99 432 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 PGBD1Q96JS3 809 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 Q96MF0 132 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 VKORC1Q9BQB6 163 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 KCTD5Q9NXV2 234 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 ETAA1Q9NY74 926 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 SYNJ2O15056 1496 aa5.95□□□□□ -1.46
SSR3-209ENST00000498205 ABCC5O15440 1437 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 CAPN8A6NHC0 703 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 MPPED1O15442 326 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 PEX1O43933 1283 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 ZFPL1O95159 310 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 AHSGP02765 367 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 PIM1P11309 404 aaPredicted RBP5.94□□□□□ -1.46
SSR3-209ENST00000498205 CYP2C9P11712 490 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 XRCC6P12956 609 aaKnown RBP eCLIP5.94□□□□□ -1.46
SSR3-209ENST00000498205 NPTX2P47972 431 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 NXPH1P58417 271 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 CRB2Q5IJ48 1285 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 Q6ZNX1 250 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 MAEAQ7L5Y9 396 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 ADGRG5Q8IZF4 528 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 BEND2Q8NDZ0 799 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 SSH3Q8TE77 659 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 KBTBD7Q8WVZ9 684 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 SIN3AQ96ST3 1273 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 AIFM2Q9BRQ8 373 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 LRIT1Q9P2V4 623 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 PCDHA6Q9UN73 950 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 DMRT1Q9Y5R6 373 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 RAD54BQ9Y620 910 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 EPN1Q9Y6I3 576 aaPredicted RBP5.94□□□□□ -1.46
SSR3-209ENST00000498205 MBD5Q9P267 1494 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 CROCC2H7BZ55 1655 aa5.94□□□□□ -1.46
SSR3-209ENST00000498205 UHRF1BP1Q6BDS2 1440 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 CNTLNQ9NXG0 1405 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 A0A0B4J269 797 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 M0QYG6 137 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 FRS3O43559 492 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 ATXN1LP0C7T5 689 aaKnown RBP5.93□□□□□ -1.46
SSR3-209ENST00000498205 FOLR3P41439 243 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 PHKA1P46020 1223 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 NDUFV1P49821 464 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 EXOSC9Q06265 439 aaKnown RBP5.93□□□□□ -1.46
SSR3-209ENST00000498205 FSTL1Q12841 308 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 TUBB3Q13509 450 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 LRRC41Q15345 812 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 NPNTQ6UXI9 565 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 OVCH2Q7RTZ1 564 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 PSD4Q8NDX1 1056 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 PLBD2Q8NHP8 589 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 LRFN3Q9BTN0 628 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 IKZF4Q9H2S9 585 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 SLITRK6Q9H5Y7 841 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 ARMT1Q9H993 441 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 KLHL42Q9P2K6 505 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 EIF4G3O43432 1585 aaKnown RBP5.93□□□□□ -1.46
SSR3-209ENST00000498205 ARHGEF5Q12774 1597 aa5.93□□□□□ -1.46
SSR3-209ENST00000498205 KTN1Q86UP2 1357 aaKnown RBP5.93□□□□□ -1.46
SSR3-209ENST00000498205 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 F5H697 171 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 MYO1CO00159 1063 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 HRGP04196 525 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 VIPR2P41587 438 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 WNT3P56703 355 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 LOXL3P58215 753 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 GBX1Q14549 363 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 PTPRRQ15256 657 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 CD300EQ496F6 205 aaPredicted RBP5.92□□□□□ -1.46
SSR3-209ENST00000498205 SLC44A4Q53GD3 710 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 VWA1Q6PCB0 445 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 PCSK4Q6UW60 755 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 LAYNQ6UX15 382 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 ZNF783Q6ZMS7 281 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 KIAA0319LQ8IZA0 1049 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 B3GALNT2Q8NCR0 500 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 OR6B3Q8NGW1 331 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 ALG8Q9BVK2 526 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 B3GNT5Q9BYG0 378 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 L1RE1Q9UN81 338 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 ROCK2O75116 1388 aaKnown RBP5.92□□□□□ -1.46
SSR3-209ENST00000498205 INSRP06213 1382 aa5.92□□□□□ -1.46
SSR3-209ENST00000498205 PTPRGP23470 1445 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 CDK13Q14004 1512 aaKnown RBP5.91□□□□□ -1.46
SSR3-209ENST00000498205 ZMYM4Q5VZL5 1548 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 GPATCH8Q9UKJ3 1502 aaKnown RBP5.91□□□□□ -1.46
SSR3-209ENST00000498205 YY2O15391 372 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 KIF20AO95235 890 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 HDCP19113 662 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 MPLP40238 635 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 MRPS35P82673 323 aaKnown RBP5.91□□□□□ -1.46
SSR3-209ENST00000498205 DDX10Q13206 875 aaKnown RBP5.91□□□□□ -1.46
SSR3-209ENST00000498205 IQCB1Q15051 598 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 LONRF3Q496Y0 759 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 TEDDM1Q5T9Z0 273 aa5.91□□□□□ -1.46
SSR3-209ENST00000498205 LMBRD2Q68DH5 695 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms