RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 ANO7Q6IWH7 933 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 CENPQQ7L2Z9 268 aaPredicted RBP13.7□□□□□ -0.22
TRIM27-207ENST00000498117 LPCAT2Q7L5N7 544 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 TMEM150AQ86TG1 271 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 SYT12Q8IV01 421 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 HDDC3Q8N4P3 179 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 OR10T2Q8NGX3 314 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 SPPL2BQ8TCT7 592 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 OSCP1Q8WVF1 389 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 ATP2A3Q93084 1043 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 DDX19AQ9NUU7 478 aaKnown RBP13.7□□□□□ -0.22
TRIM27-207ENST00000498117 DSEQ9UL01 958 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 DNM3Q9UQ16 869 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 GPSM3Q9Y4H4 160 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
TRIM27-207ENST00000498117 FLNBO75369 2602 aaKnown RBP13.7□□□□□ -0.22
TRIM27-207ENST00000498117 LACTBL1A8MY62 500 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 MAP3K13O43283 966 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 ALDH1A2O94788 518 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 CAPNS1P04632 268 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 CYP11A1P05108 521 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 HAPLN1P10915 354 aaPredicted RBP13.69□□□□□ -0.22
TRIM27-207ENST00000498117 ENGP17813 658 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 NMT1P30419 496 aaKnown RBP13.69□□□□□ -0.22
TRIM27-207ENST00000498117 IFNAR2P48551 515 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 GUCY2FP51841 1108 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 SMTNP53814 917 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
TRIM27-207ENST00000498117 FAM160A1Q05DH4 1040 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 HNRNPDQ14103 355 aaKnown RBP13.69□□□□□ -0.22
TRIM27-207ENST00000498117 KYAT1Q16773 422 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 ZNF423Q2M1K9 1284 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 C19orf48Q6RUI8 117 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 PDZD3Q86UT5 571 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 THEM5Q8N1Q8 247 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 CHCHD4Q8N4Q1 142 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 RIN3Q8TB24 985 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 USP33Q8TEY7 942 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 SPIRE2Q8WWL2 714 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 TIPINQ9BVW5 301 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
TRIM27-207ENST00000498117 SETXQ7Z333 2677 aaKnown RBP13.69□□□□□ -0.22
TRIM27-207ENST00000498117 SFI1A8K8P3 1242 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 PPEF2O14830 753 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 SEC24BO95487 1268 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 CSH1P0DML2 217 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 CSH2P0DML3 217 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 HMGA1P17096 107 aaKnown RBP13.68□□□□□ -0.22
TRIM27-207ENST00000498117 FXR2P51116 673 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRIM27-207ENST00000498117 CDR1P51861 262 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 FOSBP53539 338 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 MAPK7Q13164 816 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 BYSLQ13895 437 aaKnown RBP13.68□□□□□ -0.22
TRIM27-207ENST00000498117 ANKRD1Q15327 319 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRIM27-207ENST00000498117 CRY1Q16526 586 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 C2orf27AQ580R0 203 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 SPDYCQ5MJ68 293 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 SPATA1Q5VX52 437 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
TRIM27-207ENST00000498117 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 SLC23A3Q6PIS1 610 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 MDGA1Q8NFP4 955 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 OLIG1Q8TAK6 271 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 SPACA7Q96KW9 195 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 RPF1Q9H9Y2 349 aaKnown RBP13.68□□□□□ -0.22
TRIM27-207ENST00000498117 MMP17Q9ULZ9 603 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 GCN1Q92616 2671 aaKnown RBP13.68□□□□□ -0.22
TRIM27-207ENST00000498117 ADAMTS20P59510 1910 aa13.68□□□□□ -0.22
TRIM27-207ENST00000498117 ITPR1Q14643 2758 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 ZNF638Q14966 1978 aaKnown RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 E9PMD0 336 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 MAPTP10636 758 aaKnown RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 SCAPQ12770 1279 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 PDIA5Q14554 519 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 EML3Q32P44 896 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 C9orf57Q5W0N0 161 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 TTC30AQ86WT1 665 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 CD302Q8IX05 232 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 TMEFF1Q8IYR6 380 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 DCP1BQ8IZD4 617 aaKnown RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 SNX29Q8TEQ0 813 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 TMEM74BQ9NUR3 256 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 ABI2Q9NYB9 513 aaPredicted RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 MAGED2Q9UNF1 606 aaPredicted RBP13.67□□□□□ -0.22
TRIM27-207ENST00000498117 WNT6Q9Y6F9 365 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 PI4KAP42356 2102 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 LAMA5O15230 3695 aa13.67□□□□□ -0.22
TRIM27-207ENST00000498117 TRAV19A0A0A6YYK7 116 aa13.66□□□□□ -0.22
TRIM27-207ENST00000498117 EIF4E1BA6NMX2 242 aaKnown RBP13.66□□□□□ -0.22
TRIM27-207ENST00000498117 K7EQS6 105 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms