RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 GPR155Q7Z3F1 870 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 DENND1CQ8IV53 801 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 ARRDC4Q8NCT1 418 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 SYTL5Q8TDW5 730 aaPredicted RBP6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 LMBR1Q8WVP7 490 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 MISP3Q96FF7 219 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 PAWRQ96IZ0 340 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 PHF20Q9BVI0 1012 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 SEZ6LQ9BYH1 1024 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 C11orf49Q9H6J7 331 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 KAT14Q9H8E8 782 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 LY9Q9HBG7 655 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 ZFP64Q9NPA5 681 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 TOMM22Q9NS69 142 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 CCPG1Q9ULG6 757 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 FRMD4BQ9Y2L6 1034 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 PCDHB12Q9Y5F1 795 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 CUL9Q8IWT3 2517 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 SZT2Q5T011 3432 aa6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 LAMA2P24043 3122 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-212ENST00000497993 SYNRGQ9UMZ2 1314 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 TMEM265A0A087WTH1 108 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 A6NCN8 305 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 NFIBO00712 420 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 SH2B2O14492 632 aaPredicted RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 ZBTB5O15062 677 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 ADCY6O43306 1168 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CYTH3O43739 400 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 MGEA5O60502 916 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 MAFKO60675 156 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 DTNBO60941 627 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 TFRCP02786 760 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 SRGAP2CP0DJJ0 459 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 ITIH2P19823 946 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 PEX2P28328 305 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 MCM5P33992 734 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 HSPA4P34932 840 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 EVCP57679 992 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 PHC1P78364 1004 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 AMPD2Q01433 879 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 BLMHQ13867 455 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 PPP2R5DQ14738 602 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CDC37Q16543 378 aaPredicted RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CCDC38Q502W7 563 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CREB3L3Q68CJ9 461 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 TAPT1Q6NXT6 567 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 FAM180BQ6P0A1 224 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CYP26C1Q6V0L0 522 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 C4orf50Q6ZRC1 276 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 RALYLQ86SE5 291 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CREBRFQ8IUR6 639 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 ADGRF4Q8IZF3 695 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 OR8H2Q8N162 312 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 FAM181AQ8N9Y4 354 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 NSUN6Q8TEA1 469 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 JADE3Q92613 823 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 DDX11Q96FC9 970 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 TMEM169Q96HH4 297 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 GDF15Q99988 308 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 GTPBP4Q9BZE4 634 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 SMOC1Q9H4F8 434 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 JMJD4Q9H9V9 463 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CERS4Q9HA82 394 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 GPR27Q9NS67 375 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CCM2LQ9NUG4 571 aaPredicted RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 ADD3Q9UEY8 706 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 POLHQ9Y253 713 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 CNPY2Q9Y2B0 182 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 SF3B6Q9Y3B4 125 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 NR2E3Q9Y5X4 410 aa6.55□□□□□ -1.36
TMEM39A-212ENST00000497993 ELP1O95163 1332 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 KLRF2D3W0D1 207 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 NKRFO15226 690 aaKnown RBP eCLIP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 SHOXO15266 292 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 PPP1R11O60927 126 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 BAIAP3O94812 1187 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 CKMP06732 381 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 CALM1P0DP23 149 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 CALM2P0DP24 149 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 CALM3P0DP25 149 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 RARBP10826 455 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 ALAS1P13196 640 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 TAL1P17542 331 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 SLC16A2P36021 539 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 ZNF445P59923 1031 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 RPS6P62753 249 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 CNTN2Q02246 1040 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 ACVR2BQ13705 512 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 KRT32Q14532 448 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 WTAPQ15007 396 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 PPP2R5BQ15173 497 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 QRICH1Q2TAL8 776 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 RNF220Q5VTB9 566 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 RETSATQ6NUM9 610 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 CASC1Q6TDU7 716 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 ANKRD33Q7Z3H0 272 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 PPIL6Q8IXY8 311 aa6.54□□□□□ -1.36
TMEM39A-212ENST00000497993 COLGALT2Q8IYK4 626 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms