RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 NDST4Q9H3R1 872 aa17.31■□□□□ 0.36
FAM3A-220ENST00000497506 DPEP3Q9H4B8 488 aa17.31■□□□□ 0.36
FAM3A-220ENST00000497506 HSFX1Q9UBD0 423 aa17.31■□□□□ 0.36
FAM3A-220ENST00000497506 SLC27A5Q9Y2P5 690 aa17.31■□□□□ 0.36
FAM3A-220ENST00000497506 INSL5Q9Y5Q6 135 aa17.31■□□□□ 0.36
FAM3A-220ENST00000497506 DOCK6Q96HP0 2047 aa17.31■□□□□ 0.36
FAM3A-220ENST00000497506 PTPRDP23468 1912 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 BMP1P13497 986 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
FAM3A-220ENST00000497506 PTPN1P18031 435 aaKnown RBP17.3■□□□□ 0.36
FAM3A-220ENST00000497506 NDST1P52848 882 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 IQCB1Q15051 598 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 KRT31Q15323 416 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 SMAD2Q15796 467 aaKnown RBP17.3■□□□□ 0.36
FAM3A-220ENST00000497506 NFE2Q16621 373 aaPredicted RBP17.3■□□□□ 0.36
FAM3A-220ENST00000497506 CES5AQ6NT32 575 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 CYP26C1Q6V0L0 522 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 UNC93AQ86WB7 457 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 SPPL2BQ8TCT7 592 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 WHAMMQ8TF30 809 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 CRACR2AQ9BSW2 395 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 INTS2Q9H0H0 1204 aaKnown RBP17.3■□□□□ 0.36
FAM3A-220ENST00000497506 HMGXB4Q9UGU5 601 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 PCDHB5Q9Y5E4 795 aa17.3■□□□□ 0.36
FAM3A-220ENST00000497506 GTPBP10A4D1E9 387 aaKnown RBP17.29■□□□□ 0.36
FAM3A-220ENST00000497506 CCL16O15467 120 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 CILPO75339 1184 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 POU2F2P09086 479 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 IL9P15248 144 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 CD58P19256 250 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 CUL2Q13617 745 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 CRYBG2Q8N1P7 616 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 UBR7Q8N806 425 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 B3GALNT2Q8NCR0 500 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 MYCBPAPQ8TBZ2 947 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 SMG7Q92540 1137 aaKnown RBP17.29■□□□□ 0.36
FAM3A-220ENST00000497506 NT5C1BQ96P26 610 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 TWNKQ96RR1 684 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 FAM124BQ9H5Z6 455 aaPredicted RBP17.29■□□□□ 0.36
FAM3A-220ENST00000497506 CISHQ9NSE2 258 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 ABI2Q9NYB9 513 aaPredicted RBP17.29■□□□□ 0.36
FAM3A-220ENST00000497506 TAB2Q9NYJ8 693 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 GCNT4Q9P109 453 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 LIMA1Q9UHB6 759 aaKnown RBP17.29■□□□□ 0.36
FAM3A-220ENST00000497506 YIPF1Q9Y548 306 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
FAM3A-220ENST00000497506 DENND4AQ7Z401 1863 aa17.29■□□□□ 0.36
FAM3A-220ENST00000497506 NOTCH4Q99466 2003 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 UNC80Q8N2C7 3258 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 SMTNL1A8MU46 457 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 SOAT2O75908 522 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 LRG1P02750 347 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 HAPLN1P10915 354 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-220ENST00000497506 SLC9A1P19634 815 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 MTHFRP42898 656 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 TWF1Q12792 350 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 ORC1Q13415 861 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 CBX2Q14781 532 aaPredicted RBP17.28■□□□□ 0.36
FAM3A-220ENST00000497506 MAPRE1Q15691 268 aaKnown RBP17.28■□□□□ 0.36
FAM3A-220ENST00000497506 CFAP221Q4G0U5 840 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 MDH1BQ5I0G3 518 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 ATAT1Q5SQI0 421 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 PHLDB3Q6NSJ2 640 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 APTXQ7Z2E3 356 aaKnown RBP17.28■□□□□ 0.36
FAM3A-220ENST00000497506 ACOT1Q86TX2 421 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 ARHGEF19Q8IW93 802 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 KAT5Q92993 513 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 MYLPFQ96A32 169 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 PCED1BQ96HM7 432 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 TNIP3Q96KP6 325 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 RIPOR3Q96MK2 946 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 ELOVL4Q9GZR5 314 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 VPS16Q9H269 839 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 CBX8Q9HC52 389 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 ABCB6Q9NP58 842 aa17.28■□□□□ 0.36
FAM3A-220ENST00000497506 LRRC10BA6NIK2 292 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 XYLBO75191 536 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 ATP1A3P13637 1013 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 TBXAS1P24557 533 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-220ENST00000497506 CYP2F1P24903 491 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 PON1P27169 355 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 TUFMP49411 452 aaKnown RBP17.27■□□□□ 0.36
FAM3A-220ENST00000497506 EXOC3L4Q17RC7 722 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 TRIM65Q6PJ69 517 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 C4orf50Q6ZRC1 276 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 SPATA2LQ8IUW3 424 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-220ENST00000497506 PPM1KQ8N3J5 372 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 TTC39CQ8N584 583 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 FUBP3Q96I24 572 aaKnown RBP eCLIP17.27■□□□□ 0.36
FAM3A-220ENST00000497506 NECTIN4Q96NY8 510 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 SEPT5Q99719 369 aaPredicted RBP17.27■□□□□ 0.36
FAM3A-220ENST00000497506 NT5C1AQ9BXI3 368 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 B3GNT5Q9BYG0 378 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 POMKQ9H5K3 350 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 PIDD1Q9HB75 910 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 CEP72Q9P209 647 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
FAM3A-220ENST00000497506 CAVIN2O95810 425 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 ATF6P18850 670 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms