RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 IL10RAQ13651 578 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 PRKG1Q13976 671 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 SPARCL1Q14515 664 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 PUM1Q14671 1186 aaKnown RBP eCLIP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 STARD3Q14849 445 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 POSTNQ15063 836 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 SHHQ15465 462 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM110CQ1W6H9 321 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ARL13BQ3SXY8 428 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 NRN1LQ496H8 165 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CD276Q5ZPR3 534 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ARL6IP4Q66PJ3 421 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM180AQ6UWF9 173 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 OLFM4Q6UX06 510 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 EP400NLQ6ZTU2 488 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 BBS12Q6ZW61 710 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MOB2Q70IA6 237 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 BEND5Q7L4P6 421 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MAATS1Q7Z4T9 603 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MICU3Q86XE3 530 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 SUGP1Q8IWZ8 645 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM126BQ8IXS8 530 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 UNC5BQ8IZJ1 945 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 BCL6BQ8N143 479 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 OXR1Q8N573 874 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 GPATCH11Q8N954 259 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 NETO1Q8TDF5 533 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 OTUD7AQ8TE49 926 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CASKIN2Q8WXE0 1202 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ASB11Q8WXH4 323 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 RFFLQ8WZ73 363 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MAML1Q92585 1016 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZKSCAN4Q969J2 545 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MISP3Q96FF7 219 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 NT5C1BQ96P26 610 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 SEC62Q99442 399 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 DBNDD2Q9BQY9 259 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ADI1Q9BV57 179 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MANSC1Q9H8J5 431 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 BCO1Q9HAY6 547 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZNF287Q9HBT7 754 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 TNFRSF12AQ9NP84 129 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ITM2CQ9NQX7 267 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 BLOC1S4Q9NUP1 217 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 RIC8BQ9NVN3 520 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 PIH1D1Q9NWS0 290 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 TMEM160Q9NX00 188 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 NSMCE4AQ9NXX6 385 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 GALNT8Q9NY28 637 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 DTLQ9NZJ0 730 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM30AQ9NZY2 134 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZSWIM5Q9P217 1185 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ARHGAP28Q9P2N2 729 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 GRHPRQ9UBQ7 328 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 FTSJ1Q9UET6 329 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 AFF4Q9UHB7 1163 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 VAV3Q9UKW4 847 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZDHHC8Q9ULC8 765 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CORO2BQ9UQ03 480 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 RAXQ9Y2V3 346 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 PCDHGB2Q9Y5G2 931 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MAP3K19Q56UN5 1328 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 POLQO75417 2590 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 SETD2Q9BYW2 2564 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 POLR2AP24928 1970 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 COL4A6Q14031 1691 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 KIF24Q5T7B8 1368 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 DNHD1Q96M86 4753 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 COL5A3P25940 1745 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 TJP1Q07157 1748 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CREBBPQ92793 2442 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 COL1A1P02452 1464 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 PLXNA3P51805 1871 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 CCDC196A0A1B0GTZ2 297 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 A0A1W2PPL8 197 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 A6NCN8 305 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 MBD3L4A6NDZ8 208 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 MBD3L3A6NE82 208 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 OR2W5A6NFC9 320 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 PRAMEF25A6NGN4 478 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 RRN3P2A6NIE6 340 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM170BA6NMN3 283 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 UBE2Q2LH0YL09 131 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 H3BS24 57 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 EIF3FO00303 357 aaPredicted RBP2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 CAMTA2O94983 1202 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 MBD4O95243 580 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 LRG1P02750 347 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 TFRCP02786 760 aaKnown RBP2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 A1BGP04217 495 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 NTRK1P04629 796 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 MSL3P1P0C860 447 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 HARSP12081 509 aaKnown RBP2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 CKMT1AP12532 417 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 MYL4P12829 197 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 MALP21145 153 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 CTSSP25774 331 aa2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 APEX1P27695 318 aaKnown RBP2.84□□□□□ -1.95
CKS1BP2-201ENST00000497342 GABRB3P28472 473 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms