RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	SLC8A2	Q9UPR5	921 aa		11	□□□□□ -0.65
PSMD2-220	ENST00000496925	SNX9	Q9Y5X1	595 aa		11	□□□□□ -0.65
PSMD2-220	ENST00000496925	GVINP1	Q7Z2Y8	2422 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	SLC26A4	O43511	780 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	HUS1	O60921	280 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	KRT37	O76014	449 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	PDGFRB	P09619	1106 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	HMGA1	P17096	107 aa	Known RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	RUNX3	Q13761	415 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	POSTN	Q15063	836 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	PTPA	Q15257	358 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	SF3A2	Q15428	464 aa	Known RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	L1TD1	Q5T7N2	865 aa	Known RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	FSTL4	Q6MZW2	842 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	C1orf127	Q8N9H9	656 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	RDH13	Q8NBN7	331 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	SPPL2B	Q8TCT7	592 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	CACTIN	Q8WUQ7	758 aa	Known RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	MRPS31	Q92665	395 aa	Known RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	SLC22A12	Q96S37	553 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	CBWD1	Q9BRT8	395 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	HPS4	Q9NQG7	708 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	PANK4	Q9NVE7	773 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	RBAK	Q9NYW8	714 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	FBXO2	Q9UK22	296 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	L1RE1	Q9UN81	338 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	EXOC7	Q9UPT5	735 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	C2CD2	Q9Y426	696 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	STYXL1	Q9Y6J8	313 aa		10.99	□□□□□ -0.65
PSMD2-220	ENST00000496925	SCAMP3	O14828	347 aa	Known RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	DCLK1	O15075	740 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	IL18RAP	O95256	599 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	ABL1	P00519	1130 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	CCDC192	P0DO97	292 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	SDHB	P21912	280 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	STAT6	P42226	847 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	PSMC1	P62191	440 aa	Known RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	PLCB2	Q00722	1185 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	AASDH	Q4L235	1098 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	PPM1J	Q5JR12	505 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	PRR23C	Q6ZRP0	262 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	KBTBD6	Q86V97	674 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	TTC30A	Q86WT1	665 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	GLIS3	Q8NEA6	775 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	DNAJC19	Q96DA6	116 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	CHAMP1	Q96JM3	812 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	ZNF560	Q96MR9	790 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	HHIP	Q96QV1	700 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	FAM83C	Q9BQN1	747 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	RTKN	Q9BST9	563 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	LINC00597	Q9H2U6	94 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	TDP1	Q9NUW8	608 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	OBP2A	Q9NY56	170 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	TFIP11	Q9UBB9	837 aa	Known RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	SRPRB	Q9Y5M8	271 aa	Known RBP	10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	WNT6	Q9Y6F9	365 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925	VPS13A	Q96RL7	3174 aa		10.98	□□□□□ -0.65
PSMD2-220	ENST00000496925		A0A087X0B3	334 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	ANTXRL	A6NF34	631 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	RNF40	O75150	1001 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	TMEM191B	P0C7N4	346 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	CSH1	P0DML2	217 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	CSH2	P0DML3	217 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	GAP43	P17677	238 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	PAX3	P23760	479 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	LMO2	P25791	158 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	TXLNA	P40222	546 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	SEC13	P55735	322 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	RBP5	P82980	135 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	MYL7	Q01449	175 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	REST	Q13127	1097 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	CCIN	Q13939	588 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	INTS6L	Q5JSJ4	861 aa	Known RBP	10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	MAMSTR	Q6ZN01	415 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	MON1A	Q86VX9	555 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	WDR5B	Q86VZ2	330 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	BRSK2	Q8IWQ3	736 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	OR5B17	Q8NGF7	314 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	C2orf15	Q8WU43	125 aa	Known RBP	10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	IER2	Q9BTL4	223 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	MTMR12	Q9C0I1	747 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	ST6GALNAC4	Q9H4F1	302 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	RXFP3	Q9NSD7	469 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	DUS2	Q9NX74	493 aa	Known RBP	10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	PCDHB13	Q9Y5F0	798 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	MIA3	Q5JRA6	1907 aa		10.97	□□□□□ -0.65
PSMD2-220	ENST00000496925	C2orf78	A6NCI8	922 aa		10.96	□□□□□ -0.65
PSMD2-220	ENST00000496925	RPP40	O75818	363 aa	Known RBP	10.96	□□□□□ -0.65
PSMD2-220	ENST00000496925	PPP1R37	O75864	691 aa		10.96	□□□□□ -0.65
PSMD2-220	ENST00000496925	CLSTN1	O94985	981 aa		10.96	□□□□□ -0.65
PSMD2-220	ENST00000496925	CKM	P06732	381 aa		10.96	□□□□□ -0.65
PSMD2-220	ENST00000496925	SYT1	P21579	422 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms