RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 EIF3DO15371 548 aaKnown RBP eCLIP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 PRAMEF12O95522 483 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 CHRNB1P11230 501 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 CDC25CP30307 473 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 SOX9P48436 509 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 CASP5P51878 434 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 KPNA1P52294 538 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 MLLT6P55198 1093 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 TFAMQ00059 246 aaKnown RBP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 SMARCB1Q12824 385 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 BRSK2Q8IWQ3 736 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 GRAMD1CQ8IYS0 662 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 SPPL2BQ8TCT7 592 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 GIPC2Q8TF65 315 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 MSANTD3Q96H12 275 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 ZFYVE19Q96K21 471 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 LRRC3BQ96PB8 259 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 GCNAQ96QF7 691 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 FAM126AQ9BYI3 521 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 FGFBP2Q9BYJ0 223 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 EPC1Q9H2F5 836 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 TASP1Q9H6P5 420 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 ABI2Q9NYB9 513 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 SMG5Q9UPR3 1016 aaKnown RBP15.48■□□□□ 0.07
CXCL12-208ENST00000496375 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
CXCL12-208ENST00000496375 UBE4BO95155 1302 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 ITGB3P05106 788 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 HAPLN1P10915 354 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-208ENST00000496375 TDGF1P13385 188 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 GARTP22102 1010 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 CASP1P29466 404 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 POLR2BP30876 1174 aaKnown RBP15.47■□□□□ 0.07
CXCL12-208ENST00000496375 PNPLA4P41247 253 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 AFMP43652 599 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 CCR3P51677 355 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 UBE2HP62256 183 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 DPYDQ12882 1025 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 PPP2R5DQ14738 602 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 TAF12Q16514 161 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 ARHGAP29Q52LW3 1261 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 FAM26FQ5R3K3 315 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 C1orf228Q6PIY5 440 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 SYCP3Q8IZU3 236 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 C1orf127Q8N9H9 656 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 TTC8Q8TAM2 541 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 BLZF1Q9H2G9 400 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 C8orf33Q9H7E9 229 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-208ENST00000496375 IL21Q9HBE4 155 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 TMLHEQ9NVH6 421 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 OBP2AQ9NY56 170 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 RBAKQ9NYW8 714 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-208ENST00000496375 AGAP1Q9UPQ3 857 aa15.47■□□□□ 0.07
CXCL12-208ENST00000496375 CACNA1AO00555 2505 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 GOLGA8IPA6NC78 632 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 GOLGA8JA6NMD2 632 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 SPECC1L-ADORA2AF8WAN1 911 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 GADD45BO75293 160 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-208ENST00000496375 LDHAP00338 332 aaKnown RBP15.46■□□□□ 0.07
CXCL12-208ENST00000496375 WEE1P30291 646 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 NRLP54845 237 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 PSMD2Q13200 908 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 GAS6Q14393 721 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 TXNDC11Q6PKC3 985 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 MAMSTRQ6ZN01 415 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 STXBP4Q6ZWJ1 553 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 SPATA20Q8TB22 786 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 ZNF507Q8TCN5 953 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 BPIFB1Q8TDL5 484 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 NOC3LQ8WTT2 800 aaKnown RBP15.46■□□□□ 0.07
CXCL12-208ENST00000496375 CACTINQ8WUQ7 758 aaKnown RBP15.46■□□□□ 0.07
CXCL12-208ENST00000496375 CCDC34Q96HJ3 373 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 FAM84AQ96KN4 292 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 CBWD1Q9BRT8 395 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 SMG9Q9H0W8 520 aaKnown RBP15.46■□□□□ 0.07
CXCL12-208ENST00000496375 PCIF1Q9H4Z3 704 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 RBM12Q9NTZ6 932 aaKnown RBP15.46■□□□□ 0.07
CXCL12-208ENST00000496375 GTSE1Q9NYZ3 720 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 PCDHB5Q9Y5E4 795 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 CEP250Q9BV73 2442 aa15.46■□□□□ 0.07
CXCL12-208ENST00000496375 DENND4CQ5VZ89 1909 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 MYBPHLA2RUH7 354 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 CTHP32929 405 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 CXCL12P48061 93 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 TSPY1Q01534 308 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 SATB1Q01826 763 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 BFSP1Q12934 665 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 LRRC32Q14392 662 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 KCNB1Q14721 858 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 SCARA3Q6AZY7 606 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 RALGPS2Q86X27 583 aaPredicted RBP15.45■□□□□ 0.06
CXCL12-208ENST00000496375 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 SECISBP2LQ93073 1101 aaKnown RBP15.45■□□□□ 0.06
CXCL12-208ENST00000496375 PI4K2AQ9BTU6 479 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 SLC46A2Q9BY10 475 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 TMEM206Q9H813 350 aa15.45■□□□□ 0.06
CXCL12-208ENST00000496375 L1RE1Q9UN81 338 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms