RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 KIF20AO95235 890 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 RPN1P04843 607 aaKnown RBP16.86■□□□□ 0.29
HDAC4-213ENST00000496347 GABRR2P28476 465 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 SNW1Q13573 536 aaKnown RBP16.86■□□□□ 0.29
HDAC4-213ENST00000496347 GRM2Q14416 872 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 TAF12Q16514 161 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 SOWAHAQ2M3V2 549 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 CFAP221Q4G0U5 840 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 SLC44A4Q53GD3 710 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 VITQ6UXI7 678 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 FSIP1Q8NA03 581 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 IRF7Q92985 503 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 CCDC34Q96HJ3 373 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 OSBPL6Q9BZF3 934 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 PLA2G2FQ9BZM2 168 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 FOXQ1Q9C009 403 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 BRD9Q9H8M2 597 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 GREB1Q4ZG55 1949 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 FANCMQ8IYD8 2048 aa16.86■□□□□ 0.29
HDAC4-213ENST00000496347 STAU1O95793 577 aaKnown RBP16.85■□□□□ 0.29
HDAC4-213ENST00000496347 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
HDAC4-213ENST00000496347 WEE1P30291 646 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 MAGEA9P43362 315 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 AP3M2P53677 418 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 MAPRE1Q15691 268 aaKnown RBP16.85■□□□□ 0.29
HDAC4-213ENST00000496347 TPRG1Q6ZUI0 275 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 RDH13Q8NBN7 331 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 KBTBD7Q8WVZ9 684 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 MKNK1Q9BUB5 465 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 GZF1Q9H116 711 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-213ENST00000496347 KCTD10Q9H3F6 313 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 ATXN3LQ9H3M9 355 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 IL21Q9HBE4 155 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 TMLHEQ9NVH6 421 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 OBP2AQ9NY56 170 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 DLGAP2Q9P1A6 1054 aa16.85■□□□□ 0.29
HDAC4-213ENST00000496347 MRPS17Q9Y2R5 130 aaKnown RBP16.85■□□□□ 0.29
HDAC4-213ENST00000496347 PROB1E7EW31 1015 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 PDXKO00764 312 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 RHOBTB3O94955 611 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 WARSP23381 471 aaKnown RBP16.84■□□□□ 0.29
HDAC4-213ENST00000496347 DDX6P26196 483 aaKnown RBP eCLIP16.84■□□□□ 0.29
HDAC4-213ENST00000496347 ATICP31939 592 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 NBL1P41271 181 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 RPL10AP62906 217 aaKnown RBP16.84■□□□□ 0.29
HDAC4-213ENST00000496347 TNNC1P63316 161 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 CLDN10P78369 228 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 FCHO2Q0JRZ9 810 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 ANGPT1Q15389 498 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 STXBP5Q5T5C0 1151 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 GPR158Q5T848 1215 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 SCARA3Q6AZY7 606 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 KRBA2Q6ZNG9 492 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 C4orf50Q6ZRC1 276 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 ALYREFQ86V81 257 aaKnown RBP16.84■□□□□ 0.29
HDAC4-213ENST00000496347 OSTM1Q86WC4 334 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 MFSD6LQ8IWD5 586 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 SYAP1Q96A49 352 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-213ENST00000496347 MSANTD3Q96H12 275 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 PHOX2BQ99453 314 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 TASP1Q9H6P5 420 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 LTB4R2Q9NPC1 389 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 FAM86C1Q9NVL1 165 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 DMAC2Q9NW81 257 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 CDH9Q9ULB4 789 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 NCANO14594 1321 aa16.84■□□□□ 0.29
HDAC4-213ENST00000496347 SOBPA7XYQ1 873 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 HEPACAM2A8MVW5 462 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 ARNTLO00327 626 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 TACC1O75410 805 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 NR3C1P04150 777 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 FAM163BP0C2L3 166 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 CSH1P0DML2 217 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 CSH2P0DML3 217 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 GDI1P31150 447 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 VIPR2P41587 438 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 HELZP42694 1942 aaKnown RBP16.83■□□□□ 0.28
HDAC4-213ENST00000496347 MAGEA11P43364 429 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 NUCB2P80303 420 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 DPYDQ12882 1025 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 TRPC3Q13507 836 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 KCNB1Q14721 858 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 FAM171BQ6P995 826 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 C1orf228Q6PIY5 440 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 ZNF852Q6ZMS4 543 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 SPATA2LQ8IUW3 424 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-213ENST00000496347 ARID3BQ8IVW6 561 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-213ENST00000496347 TRMT2BQ96GJ1 504 aaKnown RBP16.83■□□□□ 0.28
HDAC4-213ENST00000496347 CEP295NLQ96MC4 621 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 MMS19Q96T76 1030 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 NELL2Q99435 816 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 PI4K2AQ9BTU6 479 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 BCO2Q9BYV7 579 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 GOLPH3LQ9H4A5 285 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 VRTNQ9H8Y1 702 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 HEBP1Q9NRV9 189 aa16.83■□□□□ 0.28
HDAC4-213ENST00000496347 UXTQ9UBK9 157 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-213ENST00000496347 FRYLO94915 3013 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms