RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 HMGA1P17096 107 aaKnown RBP13.2□□□□□ -0.3
TRIM59-207ENST00000496222 NR2F2P24468 414 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 CYP2F1P24903 491 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 GPR15P49685 360 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 AP3M2P53677 418 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 MYL7Q01449 175 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 TSPY1Q01534 308 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 TEAD2Q15562 447 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
TRIM59-207ENST00000496222 EDRF1Q3B7T1 1238 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 WDR72Q3MJ13 1102 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 MGAT5BQ3V5L5 792 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 STXBP5Q5T5C0 1151 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 TMEM150AQ86TG1 271 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 ZC3H3Q8IXZ2 948 aaKnown RBP13.2□□□□□ -0.3
TRIM59-207ENST00000496222 TMEM105Q8N8V8 129 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 GPR152Q8TDT2 470 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 ELMO3Q96BJ8 720 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 SEPT5Q99719 369 aaPredicted RBP13.2□□□□□ -0.3
TRIM59-207ENST00000496222 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 HCN4Q9Y3Q4 1203 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 COL4A3Q01955 1670 aa13.2□□□□□ -0.3
TRIM59-207ENST00000496222 GREB1Q4ZG55 1949 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 A0A1W2PRU2 124 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 SHISA7A6NL88 538 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 PI15O43692 258 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 BMP6P22004 513 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 PCSK1P29120 753 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 ATICP31939 592 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 PMS1P54277 932 aaKnown RBP13.19□□□□□ -0.3
TRIM59-207ENST00000496222 ENPEPQ07075 957 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 CFAP221Q4G0U5 840 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 ZNF658Q5TYW1 1059 aaPredicted RBP13.19□□□□□ -0.3
TRIM59-207ENST00000496222 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 SIX5Q8N196 739 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 GIPC2Q8TF65 315 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 MMS19Q96T76 1030 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 SDCBP2Q9H190 292 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 KCNH6Q9H252 994 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 CDH9Q9ULB4 789 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 COL4A2P08572 1712 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 OBSL1O75147 1896 aa13.19□□□□□ -0.3
TRIM59-207ENST00000496222 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 GNL1P36915 607 aaPredicted RBP13.18□□□□□ -0.3
TRIM59-207ENST00000496222 VIPR2P41587 438 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 MAGEA11P43364 429 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 CLCN5P51795 746 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 VAMP7P51809 220 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 CDH8P55286 799 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 PSMC1P62191 440 aaKnown RBP13.18□□□□□ -0.3
TRIM59-207ENST00000496222 PPP3CAQ08209 521 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 ADAM9Q13443 819 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 TRPC3Q13507 836 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 NCOA4Q13772 614 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
TRIM59-207ENST00000496222 ITIH5Q86UX2 942 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 SUGP1Q8IWZ8 645 aaKnown RBP13.18□□□□□ -0.3
TRIM59-207ENST00000496222 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 SMARCD2Q92925 531 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 SYAP1Q96A49 352 aaPredicted RBP13.18□□□□□ -0.3
TRIM59-207ENST00000496222 EEF2KMTQ96G04 330 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 FUBP3Q96I24 572 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM59-207ENST00000496222 LRRC3BQ96PB8 259 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 DPEP3Q9H4B8 488 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 RMND1Q9NWS8 449 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 R3HCC1Q9Y3T6 440 aaKnown RBP13.18□□□□□ -0.3
TRIM59-207ENST00000496222 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
TRIM59-207ENST00000496222 NUP210Q8TEM1 1887 aaPredicted RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 PHACTR2O75167 634 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 TADA3O75528 432 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 SMC2O95347 1197 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 F11P03951 625 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 RPL13P26373 211 aaKnown RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 GABRR2P28476 465 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 WEE1P30291 646 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 STARD6P59095 220 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 TCF15Q12870 199 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 BIRC3Q13489 604 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 DDR2Q16832 855 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 ANKRD40Q6AI12 368 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 VITQ6UXI7 678 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
TRIM59-207ENST00000496222 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
TRIM59-207ENST00000496222 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms