RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 STAT4Q14765 748 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 TTC31Q49AM3 519 aaPredicted RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 JADE1Q6IE81 842 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 C6orf89Q6UWU4 347 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 CCDC121Q6ZUS5 278 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 EXOC3L1Q86VI1 746 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 TMEM192Q8IY95 271 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 ALLCQ8N6M5 410 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 VRTNQ9H8Y1 702 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 EFCC1Q9HA90 598 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 VTA1Q9NP79 307 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 DNAJC17Q9NVM6 304 aaKnown RBP11.68□□□□□ -0.54
CMSS1-208ENST00000496116 SIX4Q9UIU6 781 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 EFR3BQ9Y2G0 817 aa11.68□□□□□ -0.54
CMSS1-208ENST00000496116 COL1A2P08123 1366 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 A0A087WZ62 844 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 CDH16O75309 829 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 ITGAVP06756 1048 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 DRD4P21917 467 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 RDXP35241 583 aaKnown RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 RFC1P35251 1148 aaPredicted RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 CDKN2BP42772 138 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 ARSEP51690 589 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 RAD23BP54727 409 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 VCPP55072 806 aaKnown RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 PTPN11Q06124 597 aaPredicted RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 ZNF268Q14587 947 aaPredicted RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 QPCTQ16769 361 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 TMEM63BQ5T3F8 832 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 TTC13Q8NBP0 860 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 GPRC5AQ8NFJ5 357 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 PPTC7Q8NI37 304 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 ZBTB10Q96DT7 871 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 TMEM176AQ96HP8 235 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 CFAP57Q96MR6 1250 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 TTC25Q96NG3 672 aa11.67□□□□□ -0.54
CMSS1-208ENST00000496116 RBM15Q96T37 977 aaKnown RBP eCLIP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 PRMT1Q99873 361 aaKnown RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 FDXACB1Q9BRP7 624 aaPredicted RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 FRMD8P1Q9BZ68 369 aaPredicted RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 NSRP1Q9H0G5 558 aaKnown RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 TPX2Q9ULW0 747 aaKnown RBP11.67□□□□□ -0.54
CMSS1-208ENST00000496116 CILPO75339 1184 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 ABHD2P08910 425 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 CDH8P55286 799 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 PLCB3Q01970 1234 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 MORF4L2Q15014 288 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 CCDC38Q502W7 563 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 RIBC1Q8N443 379 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 TTC39CQ8N584 583 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 SLC4A11Q8NBS3 891 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 DYDC1Q8WWB3 177 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 P3H4Q92791 437 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 NKD2Q969F2 451 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 ZNF317Q96PQ6 595 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 ADPGKQ9BRR6 497 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 PDZD7Q9H5P4 517 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 FAM124BQ9H5Z6 455 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 SAMD15Q9P1V8 674 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 GOLGA6L7A0A1B0GV03 622 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 H0YHG0 523 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 LRCH4O75427 683 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 FSBPO95073 299 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 HMGCRP04035 888 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 CYP2C8P10632 490 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 EPHX2P34913 555 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 MAGEA4P43358 317 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 SLC25A11Q02978 314 aaKnown RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 GPS1Q13098 491 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 TMEM132DQ14C87 1099 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 ACAP1Q15027 740 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 OASLQ15646 514 aaKnown RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 CNGA2Q16280 664 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 AMHR2Q16671 573 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 ZNF792Q3KQV3 632 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 TXNRD3NBQ6F5E7 133 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 TAPT1Q6NXT6 567 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 PCGF5Q86SE9 256 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 NT5DC4Q86YG4 428 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 LINC01465Q8N7H1 131 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 EMID1Q96A84 441 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-208ENST00000496116 MIS12Q9H081 205 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 SMYD3Q9H7B4 428 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 PCDH9Q9HC56 1237 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 ITGA11Q9UKX5 1188 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 PLXNA1Q9UIW2 1896 aa11.66□□□□□ -0.54
CMSS1-208ENST00000496116 M0QYV0 167 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 SGK1O00141 431 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 RNF8O76064 485 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 VDRP11473 427 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 ARF4P18085 180 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-208ENST00000496116 ADORA2AP29274 412 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 XYLT1Q86Y38 959 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 CCDC197Q8NCU1 140 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms