RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CYFIP2Q96F07 1278 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 CPB2Q96IY4 423 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 PPP1R16BQ96T49 567 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 FMO2Q99518 471 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 BCO2Q9BYV7 579 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 DDX47Q9H0S4 455 aaKnown RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 VRTNQ9H8Y1 702 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 IFT122Q9HBG6 1241 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 KIAA1257Q9ULG3 409 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 NFU1Q9UMS0 254 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 UBQLN1Q9UMX0 589 aaKnown RBP7.33□□□□□ -1.24
USP39-219ENST00000496047 COG5Q9UP83 839 aa7.33□□□□□ -1.24
USP39-219ENST00000496047 TSC2P49815 1807 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 PATJQ8NI35 1801 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 ZNF638Q14966 1978 aaKnown RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 GOLGA6CA6NDK9 693 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 TTI1O43156 1089 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 RNF8O76064 485 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 KRT1P04264 644 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 NFICP08651 508 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 KRT7P08729 469 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 GOLGA6DP0CG33 693 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 SETSIPP0DME0 302 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 MMP8P22894 467 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 BRD2P25440 801 aaKnown RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 CDH5P33151 784 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 ASPAP45381 313 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 EIF3BP55884 814 aaKnown RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 WNT7BP56706 349 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 GSCP56915 257 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 COPS2P61201 443 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 CAV1Q03135 178 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 PTPN11Q06124 597 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 ZNF211Q13398 564 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 ZNF394Q53GI3 561 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 PLEKHA7Q6IQ23 1121 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 TAF2Q6P1X5 1199 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 LRIG3Q6UXM1 1119 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 HOOK3Q86VS8 718 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 KATNAL2Q8IYT4 538 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 ARFGAP2Q8N6H7 521 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 LRRC52Q8N7C0 313 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 UBR7Q8N806 425 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 C7orf31Q8N865 590 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 C12orf50Q8NA57 414 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 C3orf20Q8ND61 904 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 C1orf131Q8NDD1 294 aaKnown RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 EXD1Q8NHP7 514 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 UBLCP1Q8WVY7 318 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 CASKIN2Q8WXE0 1202 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 CD101Q93033 1021 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 HPDLQ96IR7 371 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 ZNF668Q96K58 619 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 CCDC114Q96M63 670 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 FAM49AQ9H0Q0 323 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 STMN4Q9H169 189 aaPredicted RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 LHX5Q9H2C1 402 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 R3HDMLQ9H3Y0 253 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 DPP3Q9NY33 737 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 GOLGA6AQ9NYA3 693 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 PSD3Q9NYI0 1048 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 CWC15Q9P013 229 aaKnown RBP7.32□□□□□ -1.24
USP39-219ENST00000496047 HESX1Q9UBX0 185 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 PCYOX1Q9UHG3 505 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 AMACRQ9UHK6 382 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 AGAP1Q9UPQ3 857 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 GINS2Q9Y248 185 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 USTQ9Y2C2 406 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 PTPRDP23468 1912 aa7.32□□□□□ -1.24
USP39-219ENST00000496047 UMODL1Q5DID0 1318 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 A0A1B0GUA9 196 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 M0QYV0 167 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 GPR25O00155 361 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 TJP3O95049 919 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 CST3P01034 146 aaPredicted RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 HMGCRP04035 888 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 GJB1P08034 283 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 GLI1P08151 1106 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 MYZAPP0CAP1 466 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 DARSP14868 501 aaKnown RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 CYP2B6P20813 491 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 GJC1P36383 396 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 HSPA9P38646 679 aaKnown RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 CARSP49589 748 aaKnown RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 GUCY2FP51841 1108 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 DRG2P55039 364 aaKnown RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 SLC8A3P57103 927 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 IFFO1Q0D2I5 559 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 ZNF268Q14587 947 aaPredicted RBP7.31□□□□□ -1.24
USP39-219ENST00000496047 SLMAPQ14BN4 828 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 ACAP1Q15027 740 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 TERF2Q15554 542 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 CYP1B1Q16678 543 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 KIZQ2M2Z5 673 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 SV2CQ496J9 727 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 LRRC38Q5VT99 294 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 DCAF12L1Q5VU92 463 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 ZNF365Q70YC5 407 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 JAMLQ86YT9 394 aa7.31□□□□□ -1.24
USP39-219ENST00000496047 RCOR2Q8IZ40 523 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms