RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 CALB1P05937 261 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 CLTAP09496 248 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 SCNN1AP37088 669 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 RWDD2BP57060 319 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 NOP14P78316 857 aaKnown RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 FMO1Q01740 532 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 MOGSQ13724 837 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 PLCB4Q15147 1175 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 TERF2Q15554 542 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 LY6KQ17RY6 165 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 MAMDC4Q6UXC1 1216 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 CEP128Q6ZU80 1094 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 NOP9Q86U38 636 aaKnown RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ZNF410Q86VK4 478 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 RNF149Q8NC42 400 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 C1orf131Q8NDD1 294 aaKnown RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 PRPF31Q8WWY3 499 aaKnown RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 CLMNQ96JQ2 1002 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 KREMEN1Q96MU8 473 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 PCYT2Q99447 389 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 KRT12Q99456 494 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ACO2Q99798 780 aaKnown RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ZSWIM1Q9BR11 485 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ADPGKQ9BRR6 497 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 TARS2Q9BW92 718 aaKnown RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 UBE2OQ9C0C9 1292 aaKnown RBP9.17□□□□□ -0.94
EPHA4-213ENST00000495693 CCDC113Q9H0I3 377 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 TSPYL1Q9H0U9 437 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 EPC1Q9H2F5 836 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 IKZF4Q9H2S9 585 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ABHD16BQ9H3Z7 469 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ASB7Q9H672 318 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 STRIP2Q9ULQ0 834 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 HPCAL4Q9UM19 191 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 SLC6A14Q9UN76 642 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 TNFSF13BQ9Y275 285 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ALG6Q9Y672 507 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 ZNF236Q9UL36 1845 aa9.17□□□□□ -0.94
EPHA4-213ENST00000495693 POLR2AP24928 1970 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 CCL15-CCL14A0A0B4J2E2 113 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 MYO1FO00160 1098 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 PDHXO00330 501 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 FGGP02679 453 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 RARAP10276 462 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 MCF2P10911 925 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 YBX3P16989 372 aaKnown RBP eCLIP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 DESP17661 470 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 TARSP26639 723 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 GNA15P30679 374 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 POLR2BP30876 1174 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 ATICP31939 592 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 CTNNA1P35221 906 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 FNTAP49354 379 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 CDR1P51861 262 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 DRG2P55039 364 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 NLRP11P59045 1033 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 PTENP60484 403 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 GUCY2DQ02846 1103 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 DMTNQ08495 405 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 PTP4A2Q12974 167 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 TRIP4Q15650 581 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 GPR162Q16538 588 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 CCL15Q16663 113 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 ZNF792Q3KQV3 632 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 HSDL1Q3SXM5 330 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 ZNF568Q3ZCX4 644 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 ATF7IP2Q5U623 682 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 TDRD10Q5VZ19 366 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 IQSEC1Q6DN90 963 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 C20orf204Q6ZNR8 217 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 SYDE1Q6ZW31 735 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 DPP9Q86TI2 863 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 SLC47A2Q86VL8 602 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 FBXO16Q8IX29 292 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 TMEM151AQ8N4L1 468 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 GRK7Q8WTQ7 553 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 SEMA4DQ92854 862 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 RNPC3Q96LT9 517 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 NUP85Q9BW27 656 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 INO80BQ9C086 356 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 NIF3L1Q9GZT8 377 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 FZD8Q9H461 694 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 RPF1Q9H9Y2 349 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 SUGCTQ9HAC7 445 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 PDE11AQ9HCR9 933 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 TXNRD2Q9NNW7 524 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 OSGEPQ9NPF4 335 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 DNAJB12Q9NXW2 375 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 CNOT8Q9UFF9 292 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 EGFL7Q9UHF1 273 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 CPSF3Q9UKF6 684 aaKnown RBP9.16□□□□□ -0.94
EPHA4-213ENST00000495693 PCDHB4Q9Y5E5 795 aa9.16□□□□□ -0.94
EPHA4-213ENST00000495693 CNTNAP2Q9UHC6 1331 aa9.15□□□□□ -0.94
EPHA4-213ENST00000495693 SLC15A5A6NIM6 579 aa9.15□□□□□ -0.94
EPHA4-213ENST00000495693 INO80B-WBP1J3KQ70 363 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 291.1 ms