RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.94	■□□□□ 0.62
TMEM53-209	ENST00000495630	STYXL1	Q9Y6J8	313 aa		18.94	■□□□□ 0.62
TMEM53-209	ENST00000495630	KPNA7	A9QM74	516 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	ANKRD63	C9JTQ0	380 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	RNF40	O75150	1001 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	RHOBTB1	O94844	696 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	MPL	P40238	635 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	UBA7	P41226	1012 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	SYT13	Q7L8C5	426 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	FIZ1	Q96SL8	496 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	P2RY13	Q9BPV8	354 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	EBF1	Q9UH73	591 aa		18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	AGO2	Q9UKV8	859 aa	Known RBP	18.93	■□□□□ 0.62
TMEM53-209	ENST00000495630	KCNK5	O95279	499 aa		18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	ARSA	P15289	507 aa		18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	NMT1	P30419	496 aa	Known RBP	18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	DHX8	Q14562	1220 aa	Known RBP	18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	ELF2	Q15723	593 aa		18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	NFE2	Q16621	373 aa	Predicted RBP	18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	SV2C	Q496J9	727 aa		18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	NT5DC4	Q86YG4	428 aa		18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	DUSP15	Q9H1R2	295 aa	Predicted RBP	18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	ST6GALNAC4	Q9H4F1	302 aa		18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	UXT	Q9UBK9	157 aa	Predicted RBP	18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	NUP210	Q8TEM1	1887 aa	Predicted RBP	18.92	■□□□□ 0.62
TMEM53-209	ENST00000495630	PRPF40A	O75400	957 aa	Known RBP	18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	KRT18	P05783	430 aa	Known RBP	18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	GJA4	P35212	333 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	PNPLA4	P41247	253 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	TSPY1	Q01534	308 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	KARS	Q15046	597 aa	Known RBP	18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	RNF43	Q68DV7	783 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	CPA6	Q8N4T0	437 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	KIF2C	Q99661	725 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	PI4K2A	Q9BTU6	479 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	ZHX3	Q9H4I2	956 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	ECT2	Q9H8V3	914 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	BLOC1S4	Q9NUP1	217 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	MYH11	P35749	1972 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	CFAP47	Q6ZTR5	3102 aa		18.91	■□□□□ 0.62
TMEM53-209	ENST00000495630	USP24	Q9UPU5	2620 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	GREB1	Q4ZG55	1949 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	IL18RAP	O95256	599 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	APBB3	O95704	486 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	NEFL	P07196	543 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	RPL10A	P62906	217 aa	Known RBP	18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	MCM6	Q14566	821 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	POSTN	Q15063	836 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	CRELD2	Q6UXH1	353 aa	Predicted RBP	18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	CCDC26	Q8TAB7	109 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	RIN3	Q8TB24	985 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	LRRC15	Q8TF66	581 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	LEO1	Q8WVC0	666 aa	Predicted RBP	18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	RAD54L	Q92698	747 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	MYRFL	Q96LU7	910 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	HHIP	Q96QV1	700 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	ACBD6	Q9BR61	282 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	SMOC1	Q9H4F8	434 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	ABCB6	Q9NP58	842 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	TMLHE	Q9NVH6	421 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	DUS2	Q9NX74	493 aa	Known RBP	18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	PPP4R2	Q9NY27	417 aa		18.9	■□□□□ 0.62
TMEM53-209	ENST00000495630	BCLAF3	A2AJT9	711 aa	Known RBP	18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	TBCA	O75347	108 aa	Known RBP	18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	CAVIN2	O95810	425 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	FAM160A1	Q05DH4	1040 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	NR1H3	Q13133	447 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	MTF1	Q14872	753 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	RPLP0P6	Q8NHW5	317 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	OSCP1	Q8WVF1	389 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	CD101	Q93033	1021 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	ACD	Q96AP0	544 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	TRMT2B	Q96GJ1	504 aa	Known RBP	18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	ZNF560	Q96MR9	790 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	TMEM206	Q9H813	350 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	ZFHX4	Q86UP3	3567 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	SPAG17	Q6Q759	2223 aa		18.89	■□□□□ 0.61
TMEM53-209	ENST00000495630	TISP43	B9A030	160 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	NOL4	O94818	638 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	PROS1	P07225	676 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	USP17L7	P0C7H9	530 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	PLCG1	P19174	1290 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	DDIT3	P35638	169 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	GPR15	P49685	360 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	CREB5	Q02930	508 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	DMC1	Q14565	340 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	DDR2	Q16832	855 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	ZNF720	Q7Z2F6	126 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	C11orf74	Q86VG3	221 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	EFCAB13	Q8IY85	973 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	PDCL2	Q8N4E4	241 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	POMGNT1	Q8WZA1	660 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630	ATP2A3	Q93084	1043 aa		18.88	■□□□□ 0.61
TMEM53-209	ENST00000495630		H3BQV1	296 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	DCLK1	O15075	740 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	CYP2F1	P24903	491 aa		18.87	■□□□□ 0.61
TMEM53-209	ENST00000495630	SCN1A	P35498	2009 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms