RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 INCA1Q0VD86 236 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 MAPRE1Q15691 268 aaKnown RBP10.1□□□□□ -0.79
ACTN4-207ENST00000495553 SOWAHAQ2M3V2 549 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 KIAA0319Q5VV43 1072 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 OVOS1Q6IE37 1185 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 PPP1R2P3Q6NXS1 205 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 ANKS3Q6ZW76 656 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 ZNF677Q86XU0 584 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 GPR65Q8IYL9 337 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 FAM71AQ8IYT1 594 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 RNF168Q8IYW5 571 aaPredicted RBP10.1□□□□□ -0.79
ACTN4-207ENST00000495553 TXLNBQ8N3L3 684 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 EFHBQ8N7U6 833 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 TC2NQ8N9U0 490 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 RBBP8NLQ8NC74 664 aaPredicted RBP10.1□□□□□ -0.79
ACTN4-207ENST00000495553 BAP1Q92560 729 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 PABPC5Q96DU9 382 aaKnown RBP10.1□□□□□ -0.79
ACTN4-207ENST00000495553 TMEM176AQ96HP8 235 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 HEXIM2Q96MH2 286 aaKnown RBP10.1□□□□□ -0.79
ACTN4-207ENST00000495553 KREMEN1Q96MU8 473 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 ARID3AQ99856 593 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 CHST7Q9NS84 486 aa10.1□□□□□ -0.79
ACTN4-207ENST00000495553 ATP8B3O60423 1300 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 SPTLC1O15269 473 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CYP26A1O43174 497 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 THAP12O43422 761 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 AKR1B10O60218 316 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 LILRB3O75022 631 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CLASP2O75122 1294 aaKnown RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CILPO75339 1184 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CNPP09543 421 aaKnown RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 VDRP11473 427 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CD19P15391 556 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 TNFAIP3P21580 790 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 KCNA5P22460 613 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 FGFR3P22607 806 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 IGFBP6P24592 240 aaPredicted RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 TKTP29401 623 aaKnown RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 GNA15P30679 374 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 GTF2F1P35269 517 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■■■■ 34.4
ACTN4-207ENST00000495553 RAP1GAPP47736 663 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 NDST1P52848 882 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CDH8P55286 799 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 SNX16P57768 344 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 ARID5BQ14865 1188 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 SPA17Q15506 151 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 PSMD5Q16401 504 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 AAK1Q2M2I8 961 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 RTP2Q5QGT7 225 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 WSCD1Q658N2 575 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 ZNF280DQ6N043 979 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 DPY19L2P1Q6NXN4 242 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 LLGL2Q6P1M3 1020 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 ELMSAN1Q6PJG2 1045 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CD300LGQ6UXG3 332 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 LRRC8AQ8IWT6 810 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CCDC170Q8IYT3 715 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 DCP1BQ8IZD4 617 aaKnown RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 KAT5Q92993 513 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 KLHL5Q96PQ7 755 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 UBE2ZQ9H832 354 aaPredicted RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 RXFP1Q9HBX9 757 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 DDX43Q9NXZ2 648 aaKnown RBP10.09□□□□□ -0.79
ACTN4-207ENST00000495553 THEGQ9P2T0 379 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CDH9Q9ULB4 789 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 L1RE1Q9UN81 338 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 CNTN6Q9UQ52 1028 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 REV3LO60673 3130 aa10.09□□□□□ -0.79
ACTN4-207ENST00000495553 UNC80Q8N2C7 3258 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 SSU72P8A0A1W2PR75 194 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 OR6C75A6NL08 312 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 TEX28O15482 410 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 LINC01565O15544 149 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 ARHGAP6O43182 974 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 ACO1P21399 889 aaKnown RBP10.08□□□□□ -0.8
ACTN4-207ENST00000495553 PRKCIP41743 596 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 SMARCB1Q12824 385 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 ADAM15Q13444 863 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 MEA1Q16626 185 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 CTC1Q2NKJ3 1217 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 HS1BP3Q53T59 392 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 SGO2Q562F6 1265 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
ACTN4-207ENST00000495553 PRSS55Q6UWB4 352 aaPredicted RBP10.08□□□□□ -0.8
ACTN4-207ENST00000495553 TRIM72Q6ZMU5 477 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 LIMS2Q7Z4I7 341 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 B3GALNT2Q8NCR0 500 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 LNX1Q8TBB1 728 aaPredicted RBP10.08□□□□□ -0.8
ACTN4-207ENST00000495553 CASP10Q92851 521 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 ELMO3Q96BJ8 720 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 NOX5Q96PH1 765 aa10.08□□□□□ -0.8
ACTN4-207ENST00000495553 ACBD6Q9BR61 282 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms