RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 BTBD6Q96KE9 485 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 APOL6Q9BWW8 343 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 CXCL16Q9H2A7 254 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 DDX20Q9UHI6 824 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 IPPQ9Y573 584 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 FSBPO95073 299 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 ATF7P17544 494 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 NR1D1P20393 614 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 AKAP5P24588 427 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 PEX5P50542 639 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 TWF2Q6IBS0 349 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 MICALCLQ6ZW33 695 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 IFT81Q8WYA0 676 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 ELOVL4Q9GZR5 314 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 TUBGCP4Q9UGJ1 667 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 PCDHA3Q9Y5H8 950 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 CENPFP49454 3210 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 SMIM28A0A1B0GU29 152 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 CABYRO75952 493 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 C2CD6Q53TS8 623 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 YTHDF3Q7Z739 585 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 RNF180Q86T96 592 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 OTUD6BQ8N6M0 293 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 SMG8Q8ND04 991 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 KRT35Q92764 455 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 TWNKQ96RR1 684 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 CHST12Q9NRB3 414 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 KIAA1257Q9ULG3 409 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 CAPN7Q9Y6W3 813 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 TRIP11Q15643 1979 aa19.6■□□□□ 0.73
TSPAN4-212ENST00000494815 THSD7BQ9C0I4 1608 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 ESYT3A0FGR9 886 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 ZSCAN5CA6NGD5 496 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 FGGP02679 453 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 FNTAP49354 379 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 GLRA4Q5JXX5 417 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 C9orf57Q5W0N0 161 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 EP400NLQ6ZTU2 488 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 WDTC1Q8N5D0 677 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 RAET1EQ8TD07 263 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 CASKIN2Q8WXE0 1202 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 WNT8BQ93098 351 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 C18orf25Q96B23 403 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 PARP2Q9UGN5 583 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 HMGXB4Q9UGU5 601 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 KRIT1O00522 736 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 PROSCO94903 275 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 CHRNA1P02708 482 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 VDRP11473 427 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 CYP3A5P20815 502 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 GUCY1A3Q02108 690 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 MGAT3Q09327 533 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 PTGISQ16647 500 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 ATP6V1G3Q96LB4 118 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 KRT12Q99456 494 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 STRIP2Q9ULQ0 834 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 ST3GAL5Q9UNP4 418 aa19.59■□□□□ 0.73
TSPAN4-212ENST00000494815 SRRM3A6NNA2 597 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-212ENST00000494815 HMGB1P1B2RPK0 211 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-212ENST00000494815 PNPLA4P41247 253 aa19.58■□□□□ 0.72
TSPAN4-212ENST00000494815 CCDC91Q7Z6B0 441 aa19.58■□□□□ 0.72
TSPAN4-212ENST00000494815 ERICH1Q86X53 443 aa19.58■□□□□ 0.72
TSPAN4-212ENST00000494815 ZNF473Q8WTR7 871 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-212ENST00000494815 NT5C1AQ9BXI3 368 aa19.58■□□□□ 0.72
TSPAN4-212ENST00000494815 PIRO00625 290 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 HSPA6P17066 643 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 MARCKSL1P49006 195 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 NDST1P52848 882 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 RWDD2BP57060 319 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 TAP1Q03518 808 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 CNGA2Q16280 664 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 PPP2R5EQ16537 467 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 LLGL2Q6P1M3 1020 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 DENND1BQ6P3S1 775 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 FEZF2Q8TBJ5 459 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 ZNF560Q96MR9 790 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 TRIM7Q9C029 511 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 SNX9Q9Y5X1 595 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 PDCD11Q14690 1871 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 TCRBV5S1A1TA0A578 114 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 PPEF2O14830 753 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 GPR182O15218 404 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 CTSHP09668 335 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 MAN1A1P33908 653 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 MDH1P40925 334 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 MNAT1P51948 309 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 SGO2Q562F6 1265 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 SEL1L2Q5TEA6 688 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 PHLDB2Q86SQ0 1253 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 HACE1Q8IYU2 909 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 PLVAPQ9BX97 442 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 AP1M1Q9BXS5 423 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 KLK14Q9P0G3 267 aa19.57■□□□□ 0.72
TSPAN4-212ENST00000494815 O00370 1275 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 HSPA9P38646 679 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 STILQ15468 1287 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms