RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CCINQ13939 588 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 SLC39A14Q15043 492 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 Q6ZS52 159 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 TMEM86AQ8N2M4 240 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 PI4K2AQ9BTU6 479 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 ITGA11Q9UKX5 1188 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 L1RE1Q9UN81 338 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 CHURC1-FNTBB4DL54 471 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 K7ESF4 209 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 TULP1O00294 542 aaPredicted RBP24.99■■□□□ 1.59
COL27A1-208ENST00000494780 PRPF40AO75400 957 aaKnown RBP24.99■■□□□ 1.59
COL27A1-208ENST00000494780 CSH1P0DML2 217 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 CSH2P0DML3 217 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 FNTBP49356 437 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 MYL7Q01449 175 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 LONP2Q86WA8 852 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 CXorf38Q8TB03 319 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 SPATA18Q8TC71 538 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 CBWD1Q9BRT8 395 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 TMEM206Q9H813 350 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 KIF9Q9HAQ2 790 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 ABCB6Q9NP58 842 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 PARD6AQ9NPB6 346 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 GKN1Q9NS71 199 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 PANK4Q9NVE7 773 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 GDAP2Q9NXN4 497 aa24.99■■□□□ 1.59
COL27A1-208ENST00000494780 DDX43Q9NXZ2 648 aaKnown RBP24.99■■□□□ 1.59
COL27A1-208ENST00000494780 RETP07949 1114 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 RPL10AP62906 217 aaKnown RBP24.98■■□□□ 1.59
COL27A1-208ENST00000494780 BFSP1Q12934 665 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 SIM2Q14190 667 aaPredicted RBP24.98■■□□□ 1.59
COL27A1-208ENST00000494780 LPAL2Q16609 132 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 INTS6LQ5JSJ4 861 aaKnown RBP24.98■■□□□ 1.59
COL27A1-208ENST00000494780 PRR23BQ6ZRT6 265 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 CSGALNACT2Q8N6G5 542 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 MAB21L3Q8N8X9 362 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 MRPS31Q92665 395 aaKnown RBP24.98■■□□□ 1.59
COL27A1-208ENST00000494780 INTS4Q96HW7 963 aaKnown RBP24.98■■□□□ 1.59
COL27A1-208ENST00000494780 USP28Q96RU2 1077 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 FAM83CQ9BQN1 747 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 FGFBP2Q9BYJ0 223 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 PANK2Q9BZ23 570 aa24.98■■□□□ 1.59
COL27A1-208ENST00000494780 KIF26AQ9ULI4 1882 aaPredicted RBP24.98■■□□□ 1.59
COL27A1-208ENST00000494780 GOLGA8IPA6NC78 632 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 GOLGA8JA6NMD2 632 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 KIAA0391O15091 583 aaKnown RBP24.97■■□□□ 1.59
COL27A1-208ENST00000494780 HRO43593 1189 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 HOXA6P31267 233 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 GPR15P49685 360 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 RBP5P82980 135 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 DMWDQ09019 674 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 MON1AQ86VX9 555 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 CCDC65Q8IXS2 484 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 USP13Q92995 863 aaPredicted RBP24.97■■□□□ 1.59
COL27A1-208ENST00000494780 ZSCAN16Q9H4T2 348 aaPredicted RBP24.97■■□□□ 1.59
COL27A1-208ENST00000494780 PDE11AQ9HCR9 933 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 TDP1Q9NUW8 608 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 UXTQ9UBK9 157 aaPredicted RBP24.97■■□□□ 1.59
COL27A1-208ENST00000494780 CDV3Q9UKY7 258 aaKnown RBP24.97■■□□□ 1.59
COL27A1-208ENST00000494780 DNAH14Q0VDD8 3507 aa24.97■■□□□ 1.59
COL27A1-208ENST00000494780 A0A087X0B3 334 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 LRP3O75074 770 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 PRPF6O94906 941 aaKnown RBP24.96■■□□□ 1.59
COL27A1-208ENST00000494780 KRT19P08727 400 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 ATXN1P54253 815 aaKnown RBP24.96■■□□□ 1.59
COL27A1-208ENST00000494780 RUNX3Q13761 415 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 TXNDC8Q6A555 127 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 GPD1LQ8N335 351 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 TOP6BLQ8N6T0 577 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 PKMYT1Q99640 499 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 PCIF1Q9H4Z3 704 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 HPS4Q9NQG7 708 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 MAGED2Q9UNF1 606 aaPredicted RBP24.96■■□□□ 1.59
COL27A1-208ENST00000494780 MTMR6Q9Y217 621 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 CCL26Q9Y258 94 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 SNX9Q9Y5X1 595 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 DENND4CQ5VZ89 1909 aa24.96■■□□□ 1.59
COL27A1-208ENST00000494780 NOL4O94818 638 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 TMEM191BP0C7N4 346 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 ACAT1P24752 427 aaKnown RBP24.95■■□□□ 1.58
COL27A1-208ENST00000494780 LHX1P48742 406 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 SPEM2Q0P670 501 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 ZNF268Q14587 947 aaPredicted RBP24.95■■□□□ 1.58
COL27A1-208ENST00000494780 DDR2Q16832 855 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 STXBP4Q6ZWJ1 553 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 NOC3LQ8WTT2 800 aaKnown RBP24.95■■□□□ 1.58
COL27A1-208ENST00000494780 TRMT2BQ96GJ1 504 aaKnown RBP24.95■■□□□ 1.58
COL27A1-208ENST00000494780 MTMR12Q9C0I1 747 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 C2orf42Q9NWW7 574 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 SIX4Q9UIU6 781 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 GTF3C4Q9UKN8 822 aa24.95■■□□□ 1.58
COL27A1-208ENST00000494780 GABRDO14764 452 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 CYP2F1P24903 491 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 PCSK1P29120 753 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 NASPP49321 788 aaPredicted RBP24.94■■□□□ 1.58
COL27A1-208ENST00000494780 CFAP221Q4G0U5 840 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 TMEM196Q5HYL7 178 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 SDHAF4Q5VUM1 108 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 HEATR6Q6AI08 1181 aaKnown RBP24.94■■□□□ 1.58
COL27A1-208ENST00000494780 SCARA3Q6AZY7 606 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms