RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 IFIT5Q13325 482 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 KCTD21Q4G0X4 260 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 IFIT1BQ5T764 474 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 TTC23LQ6PF05 361 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 GPR180Q86V85 440 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 COLGALT2Q8IYK4 626 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 SCYL3Q8IZE3 742 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 SPOCK2Q92563 424 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 SRPK1Q96SB4 655 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 HIPK3Q9H422 1215 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 RETREG1Q9H6L5 497 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 OSGEPQ9NPF4 335 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 EPS15L1Q9UBC2 864 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 SOX13Q9UN79 622 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ERVK-11Q9UQG0 969 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MAD1L1Q9Y6D9 718 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MYH14Q7Z406 1995 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MYO3BQ8WXR4 1341 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 PDXKO00764 312 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ACSL3O95573 720 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 THRAP10827 490 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 GZMAP12544 262 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ACADSBP45954 432 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 PHKA1P46020 1223 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 TMED10P49755 219 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 DNA2P51530 1060 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ITGA8P53708 1063 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 KRT17Q04695 432 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 GRSF1Q12849 480 aaKnown RBP eCLIP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 GRM4Q14833 912 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ARSHQ5FYA8 562 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 FRA10AC1Q70Z53 315 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ANGPTL6Q8NI99 470 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MED30Q96HR3 178 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 FAM161BQ96MY7 647 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 CCDC85AQ96PX6 553 aaPredicted RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 GPATCH1Q9BRR8 931 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MKNK1Q9BUB5 465 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 DCLK3Q9C098 648 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MANSC1Q9H8J5 431 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MAGEE1Q9HCI5 957 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 VTA1Q9NP79 307 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 NPHS2Q9NP85 383 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ATAD3AQ9NVI7 634 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 FAF1Q9UNN5 650 aaPredicted RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MEGF6O75095 1541 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 CFAP69A5D8W1 941 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 SPDYE16A6NNV3 312 aaPredicted RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 GCATO75600 419 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ALOX5P09917 674 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 DCKP27707 260 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 NSUN2Q08J23 767 aaKnown RBP eCLIP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 HSPA14Q0VDF9 509 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 KLF1Q13351 362 aaPredicted RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 OXA1LQ15070 435 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 CCNG2Q16589 344 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 HSF5Q4G112 596 aaPredicted RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 FAM26FQ5R3K3 315 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 AGAP7PQ5VUJ5 663 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 SMYD5Q6GMV2 418 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 RNF207Q6ZRF8 634 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 C11orf74Q86VG3 221 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 BPHLQ86WA6 291 aaPredicted RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 CMTR1Q8N1G2 835 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 CENPSQ8N2Z9 138 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 DDHD1Q8NEL9 900 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 DUS3LQ96G46 650 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 DCUN1D1Q96GG9 259 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 PLVAPQ9BX97 442 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 OSBPL10Q9BXB5 764 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MROQ9BYG7 248 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 PDZD7Q9H5P4 517 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 MOV10Q9HCE1 1003 aaKnown RBP5.03□□□□□ -1.6
PRKD3-210ENST00000494667 HOXC10Q9NYD6 342 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 RIMS3Q9UJD0 308 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 ERGIC3Q9Y282 383 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 TBX22Q9Y458 520 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 NOX1Q9Y5S8 564 aa5.03□□□□□ -1.6
PRKD3-210ENST00000494667 PHLPP1O60346 1717 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 BAZ2AQ9UIF9 1905 aaKnown RBP5.02□□□□□ -1.61
PRKD3-210ENST00000494667 UBE4BO95155 1302 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 KDM3AQ9Y4C1 1321 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 CCDC194A0A1B0GVG4 234 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 DYTNA2CJ06 578 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 B2RBV5 119 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 RNF103O00237 685 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 CRTAMO95727 393 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 OCM2P0CE71 109 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 OCMP0CE72 109 aaPredicted RBP5.02□□□□□ -1.61
PRKD3-210ENST00000494667 KRT13P13646 458 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 PEX2P28328 305 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 GSSP48637 474 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 HSD17B4P51659 736 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 ARL4CP56559 192 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 SBK1Q52WX2 424 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 PRR23CQ6ZRP0 262 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 NEK10Q6ZWH5 1172 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 CARM1Q86X55 608 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF354CQ86Y25 554 aa5.02□□□□□ -1.61
PRKD3-210ENST00000494667 CCDC33Q8N5R6 958 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms