RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 OS9Q13438 667 aaPredicted RBP5.45□□□□□ -1.54
SMC4-224ENST00000494612 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.45□□□□□ -1.54
SMC4-224ENST00000494612 SESTD1Q86VW0 696 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 FAM46DQ8NEK8 389 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 OR6B3Q8NGW1 331 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 FBXO41Q8TF61 875 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 PHKBQ93100 1093 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 STRBPQ96SI9 672 aaKnown RBP5.45□□□□□ -1.54
SMC4-224ENST00000494612 ELAC2Q9BQ52 826 aaKnown RBP5.45□□□□□ -1.54
SMC4-224ENST00000494612 VKORC1Q9BQB6 163 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 ZDHHC8Q9ULC8 765 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 MAP3K2Q9Y2U5 619 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 FPGT-TNNI3KV9GXZ4 949 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 MAST3O60307 1309 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 ARID4BQ4LE39 1312 aaPredicted RBP5.45□□□□□ -1.54
SMC4-224ENST00000494612 SALL3Q9BXA9 1300 aa5.45□□□□□ -1.54
SMC4-224ENST00000494612 DNAJB5O75953 348 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 CFIP05156 583 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 CXCR5P32302 372 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 AK2P54819 239 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 UCP3P55916 312 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 SLFN5Q08AF3 891 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 SLC13A2Q13183 592 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 IFIT5Q13325 482 aaKnown RBP5.44□□□□□ -1.54
SMC4-224ENST00000494612 KLHDC7AQ5VTJ3 777 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 ZNF783Q6ZMS7 281 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 MORC1Q86VD1 984 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 CCDC33Q8N5R6 958 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 SLC15A4Q8N697 577 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 VPS37AQ8NEZ2 397 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 NELL1Q92832 810 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 SLC39A13Q96H72 371 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 CCDC138Q96M89 665 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 MYD88Q99836 296 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 TRIM54Q9BYV2 358 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 TINAGL1Q9GZM7 467 aaPredicted RBP5.44□□□□□ -1.54
SMC4-224ENST00000494612 VSX1Q9NZR4 365 aaPredicted RBP5.44□□□□□ -1.54
SMC4-224ENST00000494612 TBC1D30Q9Y2I9 924 aa5.44□□□□□ -1.54
SMC4-224ENST00000494612 POM121BA6NF01 834 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 POLRMTO00411 1230 aaKnown RBP5.43□□□□□ -1.54
SMC4-224ENST00000494612 NCK2O43639 380 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 GRPP07492 148 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 SPATA31D3P0C874 917 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 RGS19P49795 217 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 ALDH5A1P51649 535 aaPredicted RBP5.43□□□□□ -1.54
SMC4-224ENST00000494612 ELLP55199 621 aaPredicted RBP5.43□□□□□ -1.54
SMC4-224ENST00000494612 RPS16P62249 146 aaKnown RBP5.43□□□□□ -1.54
SMC4-224ENST00000494612 HSD11B2P80365 405 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 ERCC6LQ2NKX8 1250 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 AGAP9Q5VTM2 703 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 ARMC6Q6NXE6 501 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 SPATA31D4Q6ZUB0 917 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 FAM186BQ8IYM0 893 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 DNAJC5GQ8N7S2 189 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 OR56A1Q8NGH5 318 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 SLC9A6Q92581 669 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 MAML1Q92585 1016 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 RIPOR3Q96MK2 946 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 TTYH3Q9C0H2 523 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 REXO4Q9GZR2 422 aaKnown RBP5.43□□□□□ -1.54
SMC4-224ENST00000494612 GJB4Q9NTQ9 266 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 KLHL11Q9NVR0 708 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 HSFX1Q9UBD0 423 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 ATP11BQ9Y2G3 1177 aa5.43□□□□□ -1.54
SMC4-224ENST00000494612 MYO1CO00159 1063 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 FRS3O43559 492 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 ERN1O75460 977 aaKnown RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 LDHAP00338 332 aaKnown RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 EN2P19622 333 aaPredicted RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 ZNF543Q08ER8 600 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 MPP3Q13368 585 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 HABP2Q14520 560 aaPredicted RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 C10orf62Q5T681 223 aaPredicted RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 XRRA1Q6P2D8 792 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 PDSS2Q86YH6 399 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 KRT78Q8N1N4 520 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 CFAP52Q8N1V2 620 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 NUP133Q8WUM0 1156 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 KBTBD7Q8WVZ9 684 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 RAPGEF4Q8WZA2 1011 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 SCAMP4Q969E2 229 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 FUBP1Q96AE4 644 aaKnown RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 LRIG1Q96JA1 1093 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 STK31Q9BXU1 1019 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 PCGF6Q9BYE7 350 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 SMURF2Q9HAU4 748 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 GPR35Q9HC97 309 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 COL20A1Q9P218 1284 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 AFF4Q9UHB7 1163 aaKnown RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 TAGLN3Q9UI15 199 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 MTO1Q9Y2Z2 717 aaKnown RBP5.42□□□□□ -1.54
SMC4-224ENST00000494612 TMX2Q9Y320 296 aa5.42□□□□□ -1.54
SMC4-224ENST00000494612 A0A1B0GTW7 788 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 ISM1B1AKI9 464 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 ELANEP08246 267 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 FGFR4P22455 802 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 GCSHP23434 173 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 TNFSF4P23510 183 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 STT3AP46977 705 aa5.41□□□□□ -1.54
SMC4-224ENST00000494612 SLC11A2P49281 568 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms