RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
CSNK1E-212ENST00000494610 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
CSNK1E-212ENST00000494610 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 CHADO15335 359 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 RPN1P04843 607 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 GAP43P17677 238 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 GABRR2P28476 465 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 NLRP12P59046 1061 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 YWHAHQ04917 246 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 PSMD2Q13200 908 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 CCINQ13939 588 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 AASDHQ4L235 1098 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 GPR158Q5T848 1215 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 TRIM68Q6AZZ1 485 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 RINT1Q6NUQ1 792 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 DNAJB7Q7Z6W7 309 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 MLKLQ8NB16 471 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 APPL2Q8NEU8 664 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 BEST2Q8NFU1 509 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 RIN3Q8TB24 985 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 ATXN3LQ9H3M9 355 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 FBRSL1Q9HCM7 1045 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 SEL1LQ9UBV2 794 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 KCNG1Q9UIX4 513 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 ATRXP46100 2492 aa12.69□□□□□ -0.38
CSNK1E-212ENST00000494610 NUP210Q8TEM1 1887 aaPredicted RBP12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 MTMR11A4FU01 709 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 ANTXRLA6NF34 631 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 M0QZQ0 153 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 TM4SF5O14894 197 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 LRP3O75074 770 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 RHOBTB3O94955 611 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 OAZ2O95190 189 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 SCP2P22307 547 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 GUCY2CP25092 1073 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 ABCD1P33897 745 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 DMP1Q13316 513 aaPredicted RBP12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 CUL4BQ13620 913 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 LRRC32Q14392 662 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 DHX8Q14562 1220 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 STXBP4Q6ZWJ1 553 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 C1orf186Q6ZWK4 172 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 GRAMD1CQ8IYS0 662 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 GIPC2Q8TF65 315 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 CCL26Q9Y258 94 aa12.68□□□□□ -0.38
CSNK1E-212ENST00000494610 MYH11P35749 1972 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 MYMKA6NI61 221 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 LACTBL1A8MY62 500 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 GIPC1O14908 333 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 DCLK1O15075 740 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 FAM13AO94988 1023 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 PAPSS2O95340 614 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 IDEP14735 1019 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 ATF6P18850 670 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 SPINK2P20155 84 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 PMLP29590 882 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 MATR3P43243 847 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 EPHB3P54753 998 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 GPR17Q13304 367 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 MORC3Q14149 939 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 ZNF658Q5TYW1 1059 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 IL31Q6EBC2 164 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 FSTL4Q6MZW2 842 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 DSTYKQ6XUX3 929 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 APBB1IPQ7Z5R6 666 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 WDR5BQ86VZ2 330 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 TMEM161BQ8NDZ6 487 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 OR10T2Q8NGX3 314 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 IER2Q9BTL4 223 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 SLC46A2Q9BY10 475 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 BLZF1Q9H2G9 400 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 C8orf33Q9H7E9 229 aaPredicted RBP12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 C17orf75Q9HAS0 396 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 IL21Q9HBE4 155 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 MAN1B1Q9UKM7 699 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 ANGPTL2Q9UKU9 493 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 TSC2P49815 1807 aa12.67□□□□□ -0.38
CSNK1E-212ENST00000494610 SCN1AP35498 2009 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 FREM2Q5SZK8 3169 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 FRMD3A2A2Y4 597 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 H0YCG3 227 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 DPYSL4O14531 572 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 TOP3BO95985 862 aaKnown RBP12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 EGFP01133 1207 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 MAPTP10636 758 aaKnown RBP12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 ALDH1A3P47895 512 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 TPM4P67936 248 aa12.66□□□□□ -0.38
CSNK1E-212ENST00000494610 PLD1Q13393 1074 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms